☆42Oct 12, 2018Updated 7 years ago
Alternatives and similar repositories for tnbc_scrnaseq
Users that are interested in tnbc_scrnaseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The following repository contains code for all scRNAseq analysis and visualization performed in the paper: Single cell resolution analysi…☆17Oct 22, 2021Updated 4 years ago
- ☆17Sep 9, 2020Updated 5 years ago
- Easy Copy Number !☆21Aug 27, 2025Updated 7 months ago
- Analysis of snRNA-seq2 data coming from 3 months old mouse liver, dissecting the influence ploidy has on gene expression.☆14Dec 6, 2021Updated 4 years ago
- ☆50Feb 16, 2022Updated 4 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- IHC-image analysis workflow☆23May 29, 2018Updated 7 years ago
- ☆16May 21, 2024Updated last year
- ☆19Oct 26, 2021Updated 4 years ago
- K-means clustering for large single-cell datasets☆12Feb 10, 2026Updated last month
- Overview of the scripts used to analyse the brainimmuneatlas data☆19Oct 20, 2020Updated 5 years ago
- ☆19Oct 23, 2023Updated 2 years ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆81Oct 29, 2024Updated last year
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Oct 26, 2018Updated 7 years ago
- SCASA: Single cell transcript quantification tool☆22Nov 24, 2023Updated 2 years ago
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- ☆17Oct 3, 2023Updated 2 years ago
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆13Mar 1, 2023Updated 3 years ago
- GLASS consortium☆14May 31, 2022Updated 3 years ago
- The code for Daugherty, et al 2017 - Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans☆11Aug 24, 2017Updated 8 years ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Apr 19, 2021Updated 4 years ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 4 years ago
- ☆11May 26, 2023Updated 2 years ago
- ☆32Dec 2, 2021Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Jan 24, 2023Updated 3 years ago
- Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal can…☆128May 30, 2025Updated 9 months ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Apr 12, 2023Updated 2 years ago
- A list of scRNA-seq analysis tools☆780Mar 9, 2026Updated 2 weeks ago
- corto (Correlation Tool): an R package to generate correlation-based DPI networks☆20Mar 5, 2026Updated 3 weeks ago
- Codes for the scPLC project☆75Dec 2, 2022Updated 3 years ago
- trackc aims to produce beautiful genome tracks that are highly customizable☆17Jan 21, 2026Updated 2 months ago
- Principal analysis code used in for analysis of single cell RNAseq of primary untreated colon cancer. As described in: "Spatially organiz…☆41Sep 5, 2021Updated 4 years ago
- ☆15Dec 29, 2025Updated 2 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".☆128Sep 24, 2024Updated last year
- ☆12Nov 20, 2023Updated 2 years ago
- scAB detects multiresolution cell states with clinical significance☆22Nov 14, 2022Updated 3 years ago
- Shiny app for proteomics data analysis☆14Jul 6, 2021Updated 4 years ago
- Workflow for analysis of healthy human kidney by snRNAseq and snATACseq☆25Mar 13, 2023Updated 3 years ago
- Code base for profiling highly replicated differential gene expression RNA-seq.☆11Dec 13, 2021Updated 4 years ago
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆20Jan 17, 2020Updated 6 years ago