xiaoyeye / CNNCLinks
covolutional neural network based coexpression analysis
☆77Updated 4 years ago
Alternatives and similar repositories for CNNC
Users that are interested in CNNC are comparing it to the libraries listed below
Sorting:
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆50Updated 3 years ago
- ☆49Updated 5 years ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆42Updated last year
- ☆100Updated 2 years ago
- A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.☆91Updated 10 months ago
- Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network☆103Updated last year
- Single-cell ATAC-seq analysis via Latent feature Extraction☆102Updated last year
- ☆27Updated 2 years ago
- An actionable database of publicly available single-cell RNA-seq data☆41Updated 6 years ago
- Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space☆77Updated last week
- Iterative transfer learning with neural network improves clustering and cell type classification in single-cell RNA-seq analysis☆54Updated 3 years ago
- spatial transcriptome, single cell☆68Updated 2 years ago
- ☆31Updated 2 years ago
- SIMBA: SIngle-cell eMBedding Along with features☆62Updated 7 months ago
- scLearn:Learning for single cell assignment☆35Updated 5 months ago
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆56Updated 3 years ago
- ☆27Updated 4 years ago
- scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics☆40Updated 2 years ago
- ☆66Updated last year
- Discovering novel cell types across heterogenous single-cell experiments☆123Updated 2 years ago
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆39Updated 2 years ago
- Accurate and robust imputation of scRNA-seq data☆94Updated 5 years ago
- Collaboration with Montine, Chang, and Montgomery labs on Alzheimers / Parkinson's ATAC-seq analysis☆46Updated 4 years ago
- Semi-supervised adversarial neural networks for classification of single cell transcriptomics data☆75Updated 5 months ago
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆53Updated 5 years ago
- ☆106Updated last week
- Clonotype Neighbor Graph Analysis☆89Updated 2 months ago
- Imputation method for scRNA-seq based on low-rank approximation☆74Updated last year
- Batch balanced KNN☆161Updated last year
- repository containing analysis scripts and auxiliary files☆34Updated 5 years ago