xiaoyeye / CNNC
covolutional neural network based coexpression analysis
☆76Updated 4 years ago
Alternatives and similar repositories for CNNC:
Users that are interested in CNNC are comparing it to the libraries listed below
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆49Updated 3 years ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆41Updated last year
- ☆49Updated 5 years ago
- ☆29Updated 2 years ago
- SIMBA: SIngle-cell eMBedding Along with features☆59Updated 6 months ago
- ☆77Updated last year
- spatial transcriptome, single cell☆68Updated 2 years ago
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆38Updated 2 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆74Updated last year
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆56Updated 3 years ago
- ☆29Updated 2 years ago
- ☆45Updated 2 years ago
- Generative adversarial networks for single-cell RNA-seq imputation☆39Updated 4 years ago
- An actionable database of publicly available single-cell RNA-seq data☆41Updated 6 years ago
- Single-cell ATAC-seq analysis via Latent feature Extraction☆102Updated last year
- Iterative transfer learning with neural network improves clustering and cell type classification in single-cell RNA-seq analysis☆54Updated 3 years ago
- An accurate and efficient deep learning method for single-cell RNA-seq data imputation☆88Updated 3 years ago
- Collaboration with Montine, Chang, and Montgomery labs on Alzheimers / Parkinson's ATAC-seq analysis☆46Updated 4 years ago
- repository containing analysis scripts and auxiliary files☆33Updated 5 years ago
- ☆25Updated 4 years ago
- scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics☆40Updated 2 years ago
- A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.☆91Updated 9 months ago
- Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space☆77Updated 3 weeks ago
- Unsupervised cell functional annotation for single-cell RNA-Seq☆22Updated 2 years ago
- An unsupervised scRNA-seq analysis workflow with graph attention networks☆24Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆60Updated 2 years ago
- The source code and results for different methods on annotating external testing datsets of human and mouse.☆12Updated 4 years ago
- Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network☆103Updated last year
- ☆99Updated 2 years ago
- ☆36Updated 8 months ago