compgenome365 / TCGA-Assembler-2
TCGA-Assembler 2
☆77Updated 6 years ago
Alternatives and similar repositories for TCGA-Assembler-2:
Users that are interested in TCGA-Assembler-2 are comparing it to the libraries listed below
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆92Updated 5 months ago
- ☆29Updated 3 years ago
- Scripts to analyze TCGA data☆120Updated last year
- Immunology-related bioinformatics data and tools☆72Updated 11 months ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆80Updated last year
- Updated implementation of the GSEA-P R application for modern R distributions☆96Updated 3 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆107Updated 8 months ago
- ☆59Updated 4 years ago
- Easily download publicly available GWAS summary statistics.☆75Updated last year
- ☆78Updated last year
- ☆24Updated 7 years ago
- Bayesian network plot for the enrichment analysis results☆64Updated 5 months ago
- Tools for manipulating annotated data matrices☆91Updated 3 years ago
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆72Updated 6 years ago
- ☆58Updated 2 years ago
- ☆90Updated 4 years ago
- GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA and mRNA data in GDC☆66Updated last year
- ☆42Updated 5 years ago
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆57Updated last year
- ☆61Updated 4 years ago
- Tools used in Human Cell Landscape(HCL)☆54Updated 4 years ago
- a fully Bayesian approach to deconvolve tumor microenvironment☆60Updated 2 years ago
- Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis☆24Updated 10 months ago
- Code related to the Celligner manuscript☆46Updated 4 years ago
- ☆60Updated 4 years ago
- ☆48Updated last month
- An R package for classification of immune subtypes, in cancer, using gene expression data.☆46Updated 3 months ago
- Repository for Cibersortx☆57Updated 4 years ago
- Multiscale embedded gene co-expression network analysis☆51Updated last year