rpolicastro / scProportionTestLinks
☆64Updated last year
Alternatives and similar repositories for scProportionTest
Users that are interested in scProportionTest are comparing it to the libraries listed below
Sorting:
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆105Updated 2 months ago
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- R implementation of MULTI-seq sample classification workflow☆62Updated last year
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆71Updated 6 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆77Updated 2 years ago
- Publication Page for Satpathy*, Granja* et al 2019☆94Updated 5 years ago
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆93Updated 2 years ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆104Updated last month
- ☆61Updated 5 years ago
- ☆57Updated 4 years ago
- ☆80Updated last year
- Detect doublets in single-cell RNA-seq data☆85Updated 5 years ago
- wrapper scripts for convenient STARsolo processing of 10X and other scRNA-seq☆57Updated 2 months ago
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- A repository of pipelines for single-cell data in Nextflow DSL2☆75Updated 2 years ago
- ☆55Updated 4 years ago
- ☆107Updated 2 months ago
- ☆62Updated 4 years ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆111Updated last month
- Create stacked violin plot☆49Updated 3 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆76Updated 2 months ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- R package for semi-supervised single-cell data integration☆82Updated 2 weeks ago
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 4 years ago
- Mouse cell atlas☆59Updated 5 years ago
- Analysis pipeline for ATAC-seq data☆60Updated last year
- R package for Pathway RespOnsive GENe activity inference☆105Updated 2 years ago
- A Shiny web app for mapping datasets using Seurat v4☆127Updated 6 months ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- ☆107Updated last year