rpolicastro / scProportionTestLinks
☆73Updated 2 years ago
Alternatives and similar repositories for scProportionTest
Users that are interested in scProportionTest are comparing it to the libraries listed below
Sorting:
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆113Updated last month
- R package for Pathway RespOnsive GENe activity inference☆109Updated 2 years ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆129Updated 3 months ago
- R package for semi-supervised single-cell data integration☆90Updated 2 months ago
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆110Updated 6 months ago
- R implementation of MULTI-seq sample classification workflow☆64Updated last year
- ☆62Updated 6 years ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- Single Cell Cluster Evaluation☆97Updated 4 years ago
- Efficient and precise single-cell reference atlas mapping with Symphony☆111Updated 2 years ago
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆97Updated 2 years ago
- ☆115Updated last month
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 4 years ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆71Updated 3 years ago
- R Package for Single-Cell Dataset Processing and Visualization☆64Updated 4 years ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- Create stacked violin plot☆51Updated 3 years ago
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- Analysis of cell-cell communication at single-cell resolution☆104Updated last year
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- Framework for sensitive DE testing (using neighbourhoods)☆73Updated this week
- A Shiny web app for mapping datasets using Seurat v4☆134Updated 11 months ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆80Updated 3 years ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- R package to visualize gene expression data based on weighted kernel density estimation☆107Updated last year
- ☆63Updated 5 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 6 months ago
- A tool that allows to get UMI counts from a single cell protein assay☆86Updated 6 months ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Significance analysis for clustering single-cell RNA-sequencing data☆119Updated last year