rmrao / msa-transformerLinks
MSA Transformer reproduction code
☆86Updated 4 years ago
Alternatives and similar repositories for msa-transformer
Users that are interested in msa-transformer are comparing it to the libraries listed below
Sorting:
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆107Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆119Updated 7 months ago
- ☆107Updated last year
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆160Updated 2 years ago
- Generative Language Modeling for Antibody Design☆169Updated last year
- ☆114Updated last year
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆66Updated last year
- An evolutionary context-integrated deep learning framework for protein engineering☆65Updated 3 years ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆129Updated 3 years ago
- Improved antibody structure-based design using inverse folding☆140Updated 2 months ago
- Aligning protein generative models with experimental fitness☆108Updated last week
- RNA Multiple Sequence Alignment☆46Updated 2 years ago
- ☆204Updated last year
- Dataset and package for working with protein-protein interactions in 3D☆96Updated 5 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆82Updated last year
- open source code for Tencent tFold☆115Updated 7 months ago
- AbLang: A language model for antibodies☆150Updated 2 years ago
- Protein structure datasets for machine learning.☆112Updated 6 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆142Updated 6 months ago
- open source repository☆143Updated last year
- RiboNucleic Acid (RNA) Language Model☆132Updated 3 weeks ago
- Making Protein Language Modeling Accessible to All Biologists☆121Updated this week
- ☆80Updated 4 months ago
- Efficient implementatin of ESM family.☆74Updated last month
- RNAFlow: RNA Structure & Sequence Design via Inverse Folding-Based Flow Matching☆70Updated last year
- Repository for publicly available deep learning models developed in Rosetta community☆119Updated 4 years ago
- The first large protein language model trained follows structure instructions.☆86Updated 5 months ago
- ☆59Updated 2 years ago
- ☆113Updated 2 years ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆77Updated 8 months ago