rmrao / msa-transformerLinks
MSA Transformer reproduction code
☆84Updated 3 years ago
Alternatives and similar repositories for msa-transformer
Users that are interested in msa-transformer are comparing it to the libraries listed below
Sorting:
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆105Updated 11 months ago
- RNA Multiple Sequence Alignment☆44Updated 2 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆117Updated 6 months ago
- Generative Language Modeling for Antibody Design☆162Updated 11 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆79Updated last year
- Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"☆160Updated 2 years ago
- Official Implementation of IgGM☆82Updated 2 weeks ago
- An evolutionary context-integrated deep learning framework for protein engineering☆64Updated 3 years ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆136Updated 5 months ago
- ☆107Updated last year
- ☆113Updated last year
- Official repository of EnzymeFlow☆94Updated 9 months ago
- ☆59Updated 2 years ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆142Updated last year
- Aligning protein generative models with experimental fitness☆105Updated last month
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆59Updated last week
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆65Updated last year
- Efficient implementatin of ESM family.☆72Updated last week
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆129Updated 3 years ago
- open source code for Tencent tFold☆110Updated 6 months ago
- Code for our paper "Protein sequence design with a learned potential"☆79Updated 2 years ago
- open source repository☆141Updated last year
- ☆116Updated 3 months ago
- Improved antibody structure-based design using inverse folding☆135Updated 3 weeks ago
- Making Protein Modeling Accessible to All Biologists☆118Updated 2 weeks ago
- ☆68Updated 3 years ago
- ☆75Updated 2 years ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆74Updated 7 months ago
- ☆131Updated 2 months ago
- ☆115Updated 3 months ago