Single-sequence and Profile-based Prediction of RNA Solvent Accessibility Using Dilated Convolution Neural Network
☆13Jun 22, 2022Updated 3 years ago
Alternatives and similar repositories for RNAsnap2
Users that are interested in RNAsnap2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆107May 23, 2025Updated 10 months ago
- Sum-Product Networks (SPNs) for Robust Automatic Speaker Identification.☆11Aug 30, 2020Updated 5 years ago
- CNN model based on Google Inception model to predict regression values of regression values of Tetrahymena pyriformis IGC50 from 2D imag…☆19Nov 14, 2018Updated 7 years ago
- Deep Residual-Dense Lattice Network for Speech Enhancement☆25Nov 14, 2019Updated 6 years ago
- Proof of the concept implementation of smiles2vec paper☆33Apr 17, 2019Updated 6 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- SPOT-1D-LM: Reaching Alignment-profile-based Accuracy in Predicting Protein Secondary and Tertiary Structural Properties without Alignmen…☆11Feb 1, 2024Updated 2 years ago
- ☆22Jan 5, 2025Updated last year
- Time-Scale Modification For MATLAB☆67Jul 24, 2025Updated 8 months ago
- The standalone version / cli-tool of SPOT-Contact-Single available for public use for research purposes.☆16Feb 1, 2024Updated 2 years ago
- Improving Chest X-Ray Report Generation by Leveraging Warm-Starting☆79May 26, 2024Updated last year
- Basic RNA 3D structure comparison metrics in RNA-Puzzles, including INF, DI and RMSD. It also includes `RNA_normalizer` tool in pdb_utils…☆26Dec 3, 2024Updated last year
- CXRMate: Longitudinal Data and a Semantic Similarity Reward for Chest X-Ray Report Generation☆18Feb 20, 2025Updated last year
- The standalone version of SPOT-1D-Single available for public use for research purposes.☆24May 19, 2024Updated last year
- pytorch implementation for "RNA Secondary Structure Prediction By Learning Unrolled Algorithms"☆122Apr 7, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Robust RNA structure refinement by a nucleobase-centric sampling algorithm coupled with a backbone rotameric and quantum-mechanical-energ…☆20Apr 3, 2021Updated 5 years ago
- ☆79Apr 22, 2025Updated 11 months ago
- DeepMMSE: A Deep Learning Approach to MMSE-based Noise Power Spectral Density Estimation☆12Jun 4, 2020Updated 5 years ago
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆70Jul 22, 2024Updated last year
- lncRNA-Py is a development package for applying machine learning and deep learning to the problem of lncRNA classification, i.e. predicti…☆12Jan 24, 2025Updated last year
- Extract structural features from original PDB file☆25Jul 14, 2020Updated 5 years ago
- [Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely …☆33Oct 23, 2021Updated 4 years ago
- ☆10May 4, 2022Updated 3 years ago
- ☆10Jun 14, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Train toy models using multi-token prediction objective☆14May 8, 2024Updated last year
- ☆29Jul 10, 2020Updated 5 years ago
- Manually construct IP, TCP, UDP, and ICMP packets based on DPDK, commonly used for packet simulation, network security attack testing, fi…☆10Nov 29, 2024Updated last year
- ECCV2020_Spatial Hierarchy Aware Residual Pyramid Network for Time-of-Flight Depth Denoising☆12Sep 24, 2020Updated 5 years ago
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆36May 30, 2021Updated 4 years ago
- Create force-directed graphs of RNA secondary structures.☆111Jun 6, 2020Updated 5 years ago
- Deep residual neural network for protein contact/distance prediction developed by Xu group☆79Sep 13, 2020Updated 5 years ago
- MSA Transformer reproduction code☆92Oct 21, 2021Updated 4 years ago
- ☆16Jul 17, 2025Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Contact map alignment☆43Feb 3, 2021Updated 5 years ago
- Core files of SPNz☆16Oct 17, 2017Updated 8 years ago
- The Eigenharp software (community)☆20Feb 19, 2026Updated last month
- python codes for iDNA-ABF: multi-scale deep biological language learning model for the accurate and interpretable prediction of DNA methy…☆15May 6, 2024Updated last year
- PyTorch implements `Inception-v4, Inception-ResNet and the Impact of Residual Connections on Learning` paper.☆14Aug 19, 2022Updated 3 years ago
- Analysis pipeline for RNA structural probing mutational profiling data sequenced on Nanopore devices☆11Feb 10, 2024Updated 2 years ago
- Grid Generation☆11Mar 7, 2024Updated 2 years ago