Alternatives and similar repositories for PEVAE_Paper

Users that are interested in PEVAE_Paper are comparing it to the libraries listed below

• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆52Updated last month
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆68Updated 7 years ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆35Updated 5 years ago
• SNU-CSSB / RF2-Lite
  ☆30Updated last year
• JudeWells / chainsaw
  ☆43Updated 11 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆91Updated last year
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆41Updated 3 months ago
• alex-hh / deep-protein-generation
  ☆58Updated 2 years ago
• lehner-lab / MoCHI
  Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…
  ☆53Updated 4 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆44Updated 4 months ago
• sokrypton / map_align
  Contact map alignment
  ☆41Updated 4 years ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆51Updated 2 weeks ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆68Updated 3 years ago
• lehner-lab / doubledeepms
  Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…
  ☆21Updated 2 years ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆58Updated 4 months ago
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆76Updated last week
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆49Updated last week
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆34Updated 3 years ago
• tymor22 / protein-vec
  Repository for Protein-Vec, a protein embedding mixture of experts model
  ☆38Updated last year
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆59Updated last month
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆58Updated 8 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆65Updated 9 months ago
• hefeda / PGP
  ☆42Updated 3 months ago
• tymor22 / tm-vec
  ☆68Updated 11 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆30Updated 3 months ago
• AbSciBio / igdesign
  ☆46Updated 7 months ago
• kad-ecoli / BeEM
  Conversion of PDBx/mmCIF files to best effort/minimal PDB files
  ☆21Updated 9 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆63Updated last year
• wells-wood-research / de-stress
  DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.
  ☆26Updated 5 months ago