Code, data and notebooks for engineering enzymes with ultra-high throughput microfluidics. Please read our accompanying paper for details.
☆11Dec 22, 2024Updated last year
Alternatives and similar repositories for lrDMS-IRED
Users that are interested in lrDMS-IRED are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Benchmarking equivariant neural networks.☆10Dec 5, 2020Updated 5 years ago
- Bringing bio (molecules and more) to the Hugging Face Datasets library☆13Jun 29, 2025Updated last year
- This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.☆23Jun 26, 2023Updated 3 years ago
- Chroma Protein Diffusion Model☆12Nov 16, 2023Updated 2 years ago
- Send data to and from pymol from a remote server (e.g. a cluster running deep learning workflows)☆38Feb 17, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆37Jan 14, 2025Updated last year
- A geometry-complete SE(3)-equivariant perceptron network (GCPNet) for 3D graphs. (Bioinformatics)☆56Apr 20, 2025Updated last year
- [NeurIPS 2025 spotlight] Efficient factorized variant of the IPA module.☆47Nov 14, 2025Updated 11 months ago
- GeneBac: a modular framework for predicting antibiotic resistance from DNA sequence.☆19Jan 3, 2024Updated 2 years ago
- A simple DIffusion LM approach.☆27May 22, 2023Updated 3 years ago
- TABR-BERT: an Accurate and Robust BERT-based Transfer Learning Model for TCR-pMHC Interaction Prediction☆12Jul 19, 2024Updated 2 years ago
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated last year
- Python package for AAIndex databases (https://www.genome.jp/aaindex/)☆15Aug 7, 2026Updated 2 months ago
- ☆38Oct 23, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ML-guided enzyme engineering☆86Apr 13, 2026Updated 6 months ago
- ☆12Oct 28, 2026Updated last week
- Confit is a complete and easy-to-use configuration framework aimed at improving the reproducibility of experiments by relying on the Pyth…☆11Sep 9, 2026Updated last month
- ☆35Feb 12, 2025Updated last year
- PyMOL plugin - drive PyMOL from Claude Code, Codex, Cursor, or any MCP client.☆44Oct 2, 2026Updated last month
- How Post-Training Shapes Biological Reasoning Models☆17Jun 16, 2026Updated 4 months ago
- MSA Transformer reproduction code☆92Oct 21, 2021Updated 5 years ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆102Jul 29, 2024Updated 2 years ago
- The official repository for "Multi-Scale Protein Structure Modelling with Geometric Graph U-Nets"☆13Jan 7, 2026Updated 9 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- TwiMed: Twitter and PubMed Comparable Corpus of Drugs, Diseases, Symptoms and their Relations☆11May 24, 2017Updated 9 years ago
- Training terminal agents to recover from failed executions☆22Oct 14, 2026Updated 3 weeks ago
- A curated list of papers and resources on Structure-Based Drug Design (SBDD)☆12Jun 24, 2024Updated 2 years ago
- Code to reproduce experiments in "Accelerating Bayesian Optimization for Protein Design with Denoising Autoencoders" (Stanton et al 2022)☆77May 19, 2024Updated 2 years ago
- ☆12Mar 18, 2024Updated 2 years ago
- ☆40Sep 17, 2024Updated 2 years ago
- Simple Scalable Discrete Diffusion for text in PyTorch☆37Sep 27, 2024Updated 2 years ago
- ☆10Jan 15, 2025Updated last year
- ☆10May 31, 2026Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- mosaic webapp☆13Apr 2, 2026Updated 7 months ago
- Statistics, Visualizations and Paper Links of Machine Learning Conferences☆12Dec 27, 2020Updated 5 years ago
- Pose checks for 3D Structure-based Drug Design methods☆102Nov 3, 2024Updated 2 years ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆195Jun 24, 2024Updated 2 years ago
- We believe that under the current technological conditions, protein structure prediction models determine the upper limit of protein desi…☆11Oct 20, 2026Updated 2 weeks ago
- Reaction-Conditioned Virtual Screening of Enzymes☆50Jun 13, 2026Updated 4 months ago
- Benchmarking common tasks on proteins in various languages and packages☆43Dec 27, 2020Updated 5 years ago