sokrypton / af_backprop
☆36Updated 4 months ago
Alternatives and similar repositories for af_backprop:
Users that are interested in af_backprop are comparing it to the libraries listed below
- ☆99Updated 2 years ago
- DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.☆37Updated 3 weeks ago
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆27Updated 2 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆34Updated 4 years ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆76Updated 3 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆32Updated 8 months ago
- dMaSIF implementation for google colab☆30Updated last year
- Official repository of EnzymeFlow☆75Updated 2 months ago
- TMol☆31Updated this week
- ☆41Updated 5 months ago
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆99Updated 3 months ago
- Efficient manipulation of protein structures in Python☆51Updated 3 months ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆88Updated 6 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆64Updated this week
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆36Updated this week
- Modelling of Large Protein Complexes☆37Updated 11 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆36Updated 2 months ago
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆55Updated 3 months ago
- GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!☆53Updated 2 years ago
- Open source code for AlphaFold.☆39Updated 2 years ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆47Updated last month
- A benchmark for 3D biomolecular structure prediction models☆52Updated last month
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆34Updated 2 years ago
- Calculation of interatomic interactions in molecular structures☆83Updated 5 months ago
- Source code and examples for AlphaFold Unmasked☆55Updated last month
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆33Updated last week
- Generative diverse protein backbones by protein language model☆29Updated 2 months ago
- ☆61Updated last month
- Improved antibody structure-based design using inverse folding☆90Updated last month
- Official repository for Target-Specific De Novo Peptide Binder Design with DiffPepBuilder☆76Updated 3 weeks ago