Alternatives and similar repositories for af_backprop:

Users that are interested in af_backprop are comparing it to the libraries listed below

• jproney / AF2Rank
  ☆100Updated 2 years ago
• wells-wood-research / PDBench
  PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
  ☆28Updated 2 years ago
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆33Updated 10 months ago
• samgoldman97 / enzyme-datasets
  Enzyme datasets used to benchmark enzyme-substrate promiscuity models
  ☆34Updated 3 years ago
• casperg92 / MaSIF_colab
  dMaSIF implementation for google colab
  ☆32Updated 2 years ago
• Graylab / DFMDock
  DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.
  ☆43Updated last month
• BioinfoMachineLearning / MULTICOM3
  The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…
  ☆28Updated last year
• uw-ipd / tmol
  TMol
  ☆32Updated this week
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆57Updated 3 months ago
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆75Updated last month
• KULL-Centre / _2024_cagiada_stability
  ☆65Updated 3 weeks ago
• ShintaroMinami / PyDSSP
  A simplified implementation of DSSP algorithm for PyTorch and NumPy
  ☆83Updated last month
• coreyhowe999 / RSO
  ☆21Updated 5 months ago
• patrickbryant1 / MoLPC
  Modelling of Large Protein Complexes
  ☆37Updated last year
• sokrypton / ColabBio
  random colab notebooks for biology
  ☆26Updated 3 weeks ago
• bene837 / af2seq
  ☆43Updated 7 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆31Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆46Updated 4 months ago
• AbSciBio / igdesign
  ☆37Updated 3 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆53Updated 5 months ago
• brennanaba / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆32Updated 2 years ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆65Updated 7 months ago
• sokrypton / af2bind
  ☆49Updated 3 weeks ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆34Updated 4 years ago
• Kuhlman-Lab / evopro
  ☆77Updated last month
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆60Updated this week
• aivant / peppr
  It's a package for evaluation of predicted poses, right?
  ☆46Updated this week
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆31Updated 4 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆56Updated 2 months ago
• iamysk / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆47Updated this week