rmrao / evoLinks
Mono-repo for protein utilities.
☆21Updated 4 years ago
Alternatives and similar repositories for evo
Users that are interested in evo are comparing it to the libraries listed below
Sorting:
- ☆76Updated 4 years ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆110Updated last year
- Aligning protein generative models with experimental fitness☆117Updated 3 months ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆127Updated 2 months ago
- ☆60Updated 3 years ago
- Efficient implementatin of ESM family.☆80Updated 5 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆35Updated 2 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆91Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Updated 2 months ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆62Updated 3 weeks ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆133Updated 4 years ago
- AbLang: A language model for antibodies☆157Updated 2 years ago
- Unconstrained lattice antibody-antigen bindings generator☆111Updated 2 months ago
- ☆109Updated 2 years ago
- RNA Multiple Sequence Alignment☆47Updated 2 years ago
- Repository for publicly available deep learning models developed in Rosetta community☆123Updated 4 years ago
- Compressing protein structures effectively with torsion angles☆186Updated last month
- ☆120Updated last week
- AlphaBind code + model accompanying pre-print☆89Updated 6 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆86Updated last year
- ☆53Updated last month
- ☆47Updated last year
- Generative Language Modeling for Antibody Design☆180Updated last year
- ☆128Updated 3 weeks ago
- Improved antibody structure-based design using inverse folding☆152Updated 2 months ago
- PLM based active learning model for protein engineering☆85Updated last year
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆99Updated last month
- Code for our paper "Protein sequence design with a learned potential"☆82Updated 2 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago