Mono-repo for protein utilities.
☆21Oct 26, 2021Updated 4 years ago
Alternatives and similar repositories for evo
Users that are interested in evo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Class to view Alphafold models☆11Jan 20, 2023Updated 3 years ago
- ☆11Apr 25, 2021Updated 5 years ago
- Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.☆18Jan 14, 2025Updated last year
- MSA Transformer reproduction code☆92Oct 21, 2021Updated 4 years ago
- Meta in-context learning for protein fitness prediction☆19Feb 7, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- All-atom inverse protein folding through discrete flow matching (ICML2025)☆37Mar 22, 2026Updated 3 months ago
- GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!☆60Oct 17, 2022Updated 3 years ago
- ☆26May 15, 2019Updated 7 years ago
- Protein generative model conditioned on Gene Ontology terms☆34Jul 17, 2022Updated 3 years ago
- SLIP is a sandbox environment for engineering protein sequences with synthetic fitness functions.☆20Jan 17, 2024Updated 2 years ago
- Scripts and data to run AbDesign as described in Tools for protein science 2021☆13Nov 4, 2020Updated 5 years ago
- ☆18Mar 13, 2024Updated 2 years ago
- OPUS-Rota4: A Gradient-Based Protein Side-Chain Modeling Framework Assisted by Deep Learning-Based Predictors☆10Apr 14, 2022Updated 4 years ago
- Sequences from Adaptyv Bio’s EGFR Protein Design Competition☆16Aug 28, 2025Updated 10 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆27May 9, 2022Updated 4 years ago
- ☆23Jun 11, 2026Updated 3 weeks ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆62Apr 8, 2021Updated 5 years ago
- A protein 3D structure prediction application☆67May 5, 2021Updated 5 years ago
- ☆12Feb 12, 2024Updated 2 years ago
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆33Jan 17, 2023Updated 3 years ago
- Recommender for suggesting letter writers 👍☆34Aug 12, 2024Updated last year
- Homework 3 for Berkeley CS 280: our version of the MIT Mini Places challenge☆12Mar 5, 2016Updated 10 years ago
- HIT-Computer-Network-Course-notes☆12May 10, 2017Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆31Aug 9, 2024Updated last year
- Conveniently perform ASCAT copy-number analysis from Tumor-Normal or Tumor only BAM files in R☆12Dec 6, 2021Updated 4 years ago
- Conditional Variational Autoencoder for the prediction of site-specific recombinases selective for a specified target site☆12Jun 23, 2023Updated 3 years ago
- ☆38Jun 30, 2024Updated 2 years ago
- A collection of bioinformatics data analysis notebooks focused on providing examples of current best practices in sequencing data analysi…☆17Jun 25, 2026Updated last week
- ☆14Apr 7, 2023Updated 3 years ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Mar 7, 2025Updated last year
- Junction-tree variational auto-encoder for Python 3 (https://arxiv.org/abs/1802.04364)☆12Apr 7, 2021Updated 5 years ago
- ☆29Jul 10, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- GUIDEMOL: a Python graphical user interface for molecular descriptors based on RDKit☆14Jan 25, 2024Updated 2 years ago
- Materials and Jekyll website for the Wednesday software working group.☆10Feb 17, 2017Updated 9 years ago
- Analysis pipeline to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and …☆22Jun 8, 2026Updated 3 weeks ago
- ☆18Apr 17, 2026Updated 2 months ago
- ☆11Mar 12, 2026Updated 3 months ago
- TwiMed: Twitter and PubMed Comparable Corpus of Drugs, Diseases, Symptoms and their Relations☆11May 24, 2017Updated 9 years ago
- Attempt at reproduction of AlphaFold2☆98Oct 23, 2024Updated last year