Alternatives and similar repositories for evo

Users that are interested in evo are comparing it to the libraries listed below

• alex-hh / deep-protein-generation
  ☆59Updated 2 years ago
• csi-greifflab / Absolut
  Unconstrained lattice antibody-antigen bindings generator
  ☆110Updated last year
• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆119Updated 7 months ago
• J-SNACKKB / FLIP
  A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
  ☆107Updated last year
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆70Updated 4 years ago
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆61Updated 2 years ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆108Updated 2 weeks ago
• fhalab / MLDE
  A machine-learning package for navigating combinatorial protein fitness landscapes.
  ☆129Updated 3 years ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆71Updated 4 months ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆82Updated last year
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆74Updated last month
• aqlaboratory / rgn2
  ☆107Updated last year
• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆170Updated last year
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆58Updated 2 weeks ago
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆59Updated 4 years ago
• OATML-Markslab / Tranception
  Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"
  ☆160Updated 2 years ago
• luo-group / ConFit
  Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape
  ☆33Updated last year
• AbSciBio / igdesign
  ☆47Updated 9 months ago
• fhalab / SPGen
  ☆20Updated 4 years ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆84Updated last year
• yoakiyama / MSA_Pairformer
  ☆105Updated last week
• debbiemarkslab / SeqDesign
  Protein design and variant prediction using autoregressive generative models
  ☆114Updated last year
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆51Updated last year
• robpearc / DeepFoldRNA
  ☆35Updated last year
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆30Updated 7 months ago
• gjoni / trDesign
  trRosetta for protein design
  ☆183Updated 4 years ago
• oxpig / AbLang
  AbLang: A language model for antibodies
  ☆151Updated 2 years ago
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆164Updated last year
• luoyunan / ECNet
  An evolutionary context-integrated deep learning framework for protein engineering
  ☆65Updated 3 years ago
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆46Updated 2 years ago