Bitbol-Lab / Iterative_maskingLinks
Iterative masking algorithm on MSA Transformer to generate synthetic sequences
☆26Updated last year
Alternatives and similar repositories for Iterative_masking
Users that are interested in Iterative_masking are comparing it to the libraries listed below
Sorting:
- ☆70Updated 4 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆48Updated last week
- Structure-conditioned masked language modeling for protein sequence design☆65Updated last year
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆68Updated 11 months ago
- ☆85Updated 10 months ago
- ☆44Updated 10 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆44Updated 8 months ago
- Template-based protein design with Raygun☆71Updated last week
- Protein Design by Machine Learning guided Directed Evolution☆44Updated 4 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆63Updated 3 weeks ago
- Parametric Building of de novo Functional Topologies☆45Updated 3 years ago
- ☆43Updated 7 months ago
- ☆30Updated last year
- code for IDR binding paper 2025☆43Updated 5 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆70Updated last month
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆31Updated last year
- Extension of ThermoMPNN for double mutant predictions☆41Updated this week
- Fast and accurate protein domain segmentation using Invariant Point Attention☆40Updated 2 months ago
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆38Updated 7 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆78Updated last year
- PLM based active learning model for protein engineering☆82Updated last year
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆57Updated 2 months ago
- ☆27Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated last month
- ☆60Updated last year
- Homomer symmetry prediction from protein sequence☆30Updated 4 months ago
- ☆86Updated last week
- Structure prediction of alternative protein conformations☆76Updated 5 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 4 years ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆60Updated 5 months ago