Bitbol-Lab / Iterative_maskingLinks
Iterative masking algorithm on MSA Transformer to generate synthetic sequences
☆26Updated last year
Alternatives and similar repositories for Iterative_masking
Users that are interested in Iterative_masking are comparing it to the libraries listed below
Sorting:
- Fast deep learning methods for large-scale protein-protein interaction screening☆52Updated last month
- ☆71Updated 6 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆71Updated 3 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆45Updated 10 months ago
- ☆44Updated last year
- Structure-conditioned masked language modeling for protein sequence design☆70Updated last year
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆39Updated 9 months ago
- Extension of ThermoMPNN for double mutant predictions☆43Updated last month
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆69Updated last year
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- Protein Design by Machine Learning guided Directed Evolution☆46Updated 5 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆66Updated 2 months ago
- ☆53Updated last month
- ☆46Updated 8 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆66Updated 10 months ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆63Updated 2 weeks ago
- ☆38Updated last year
- ☆86Updated last year
- ☆30Updated last year
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆17Updated last year
- ☆36Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 4 months ago
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆59Updated last month
- ☆96Updated 2 weeks ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated 2 years ago
- Template-based protein design with Raygun☆72Updated 2 weeks ago
- AlphaLink: Integrating crosslinking MS data into OpenFold☆68Updated last year
- ☆19Updated 10 months ago
- Machine learning prediction of enzyme optimum pH☆45Updated 4 months ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆57Updated last month