Code for pmVAE model, seen in ICML CompBio '21
☆12Apr 12, 2024Updated 2 years ago
Alternatives and similar repositories for pmvae
Users that are interested in pmvae are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Apr 8, 2025Updated last year
- Scalable framework for integrating single-cell omics with genetic data using AnnData.☆21Updated this week
- Matplotlib style for scientific publications☆15Updated this week
- PROGENY Python implementation☆12Apr 5, 2022Updated 4 years ago
- Shadow objects for AnnData and MuData (experimental)☆11Feb 28, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Unsupervised Instance Segmentation in Microscopy☆27Apr 3, 2024Updated 2 years ago
- Research Paper: "Graph Contrastive Learning as a Versatile Foundation for Advanced scRNA-seq Data Analysis"☆11Nov 20, 2024Updated last year
- ☆14Jan 21, 2021Updated 5 years ago
- Code for paper "Principled feature attribution for unsupervised gene expression analysis"☆13Mar 7, 2023Updated 3 years ago
- ☆22Aug 17, 2023Updated 3 years ago
- Deep exponential families for single-cell data.☆21Aug 17, 2026Updated last week
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆21Aug 10, 2023Updated 3 years ago
- Deep learning for single-cell transcript counts☆90Mar 14, 2025Updated last year
- Short reading course on Robust Statistics☆12Dec 2, 2019Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Simple scVI implementation☆13Updated this week
- Code for verifying deep neural feature ansatz☆23May 3, 2023Updated 3 years ago
- A flexible and extensible API for annotated 2D matrix data stored in multiple underlying formats.☆85Jul 24, 2026Updated last month
- ☆15Aug 7, 2021Updated 5 years ago
- ☆12Sep 25, 2021Updated 4 years ago
- ☆12Jun 24, 2026Updated 2 months ago
- a simply crawler framework☆12Jun 5, 2023Updated 3 years ago
- The uncompromising Jupyter notebook formatter.☆14Jan 26, 2024Updated 2 years ago
- Single-cell copy number calling and event history reconstruction.☆28Updated this week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Map single-cell transcriptomes to copy number evolutionary trees.☆14Aug 18, 2024Updated 2 years ago
- Challenge details, inputs, and results for the SAMPL7 series of challenges☆48Nov 2, 2021Updated 4 years ago
- Accelerated, Python-only, single-cell integration benchmarking metrics☆97Updated this week
- Inference in Bayesian Networks with R☆12Feb 6, 2023Updated 3 years ago
- Companion package to the 2nd edition of the book "Robust Statistics: Theory and Methods"☆21Updated this week
- LongSom tool for long-reads☆12May 20, 2025Updated last year
- An interface for Nested Stochastic Block Model for single cell analysis☆39Aug 18, 2026Updated last week
- Implementation of "Semi-supervised learning of hierarchical representations of molecules using neural message passing" (arXiv:1711.10168)☆14Jun 20, 2018Updated 8 years ago
- Repository for neural implicit k-space project☆16Aug 18, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- DeepProfile framework, which learns a variational autoencoder (VAE) network from a vast quantity of publicly available gene expression sa…☆19Jun 7, 2018Updated 8 years ago
- Official implementation of JAMIE, Joint variational Autoencoders for Multimodal Imputation and Embedding☆17Sep 11, 2025Updated 11 months ago
- This is the code for our paper DAAIN: Detection of Anomalous and AdversarialInput using Normalizing Flows☆15Jun 1, 2021Updated 5 years ago
- scAce: an adaptive embedding and clustering method for scRNA-seq data☆12Sep 8, 2023Updated 2 years ago
- A Python toolkit for setting up benchmarking dataset using biomedical networks☆22Aug 17, 2026Updated last week
- Single sample network reconstruction in R☆24Apr 6, 2020Updated 6 years ago
- ☆13Apr 13, 2020Updated 6 years ago