const-ae / linear_perturbation_prediction-PaperLinks
☆54Updated 2 months ago
Alternatives and similar repositories for linear_perturbation_prediction-Paper
Users that are interested in linear_perturbation_prediction-Paper are comparing it to the libraries listed below
Sorting:
- ☆84Updated last year
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆148Updated 7 months ago
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆112Updated last year
- Models and datasets for perturbational single-cell omics☆164Updated 3 years ago
- ☆35Updated last week
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆48Updated 2 months ago
- 🏃 The go-to single-cell Foundation Model☆108Updated this week
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆53Updated 3 years ago
- ☆37Updated 2 months ago
- ☆56Updated last year
- ☆42Updated 4 months ago
- Modeling complex perturbations with CellFlow☆87Updated last week
- ☆85Updated 2 years ago
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆51Updated last month
- Additional code and analysis from the single-cell integration benchmarking project☆67Updated 2 years ago
- ☆34Updated 5 months ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆104Updated last week
- A simulator for single cell multi-omics and spatial omics data that provides ground truth to benchmark a wide range of methods.☆61Updated last week
- Formalizing and benchmarking open problems in single-cell genomics☆57Updated 3 months ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆73Updated last year
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆43Updated 2 years ago
- End-to-end analysis of spatial multi-omics data☆93Updated 2 months ago
- SIMBA: SIngle-cell eMBedding Along with features☆63Updated 11 months ago
- Comprehensive suite for evaluating perturbation prediction models☆89Updated last week
- spatial transcriptome, single cell☆70Updated 2 years ago
- Unsupervised Deep Disentangled Representation of Single-Cell Omics☆51Updated last week
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆96Updated 6 months ago
- ☆139Updated last year
- CancerFoundation: A single-cell RNA sequencing foundation model to decipher drug resistance in cancer☆24Updated 3 weeks ago
- ☆37Updated last month