rargelaguet / thesisLinks
University of Cambridge PhD thesis
☆15Updated 4 years ago
Alternatives and similar repositories for thesis
Users that are interested in thesis are comparing it to the libraries listed below
Sorting:
- Transcriptional burst kinetics inference and analysis described in the article "Genomic encoding of transcriptional burst kinetics" (Lars…☆39Updated last year
- processes GoT amplicon data and generates a table of metrics☆30Updated 3 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- Causal inference, differential expression, and co-expression for scRNA-seq☆18Updated 3 years ago
- binned motif enrichment analysis and visualisation☆40Updated 2 weeks ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- ☆35Updated 4 months ago
- Scripts for using scanpy☆36Updated 4 months ago
- Snakemake pipeline for microexon discovery and quantification☆20Updated 6 months ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆32Updated 3 years ago
- scNMT-seq gastrulation☆42Updated 2 years ago
- Single Cell Epigenome-based Inference of Activity☆19Updated last year
- epigenome analysis to rank transcription factors☆30Updated 2 years ago
- High-definition modeling of chromatin + transcriptomics data☆24Updated 3 months ago
- A method for analyzing scATAC-seq experiments.☆32Updated 3 weeks ago
- supporting code for the multinomial single cell RNA-Seq paper☆52Updated 4 years ago
- Epimap processing and analysis code repository☆33Updated 2 years ago
- ☆17Updated last year
- ☆43Updated last year
- Using BCR and expression for sequence embedding☆23Updated last month
- ☆12Updated last year
- RNA velocity validation☆22Updated 3 years ago
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆53Updated 11 months ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- Population balance analysis☆44Updated 6 years ago
- R package with motifs for use with chromVAR☆28Updated 7 years ago
- Builds a PEP from SRA or GEO accessions☆52Updated this week
- Geometry-preserving random sampling☆87Updated 8 months ago
- Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens☆42Updated 2 years ago
- A single cell sequencing read simulator.☆33Updated 9 months ago