NuttyLogic / BSBolt
BiSulfite Bolt - A Bisulfite Sequencing Alignment and Processing Tool
☆21Updated last year
Alternatives and similar repositories for BSBolt:
Users that are interested in BSBolt are comparing it to the libraries listed below
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 2 months ago
- Evolutionary Transcriptomics with R☆42Updated last week
- Genomic Association Tester☆30Updated last year
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆21Updated 7 years ago
- ☆23Updated 3 years ago
- ☆25Updated last month
- A Nextflow workflow to generate lift over files for any pair of genomes☆56Updated 2 weeks ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆41Updated last year
- ☆21Updated 2 months ago
- Splice junction analysis and filtering from BAM files☆39Updated 2 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 5 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆32Updated 2 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- ☆17Updated 2 years ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆17Updated last week
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 9 years ago
- RNA-seq workflow: differential transcript usage☆20Updated last year
- Pipeline for structural variation detection in cohorts☆49Updated 3 years ago
- Tools for processing and analyzing structural variants.☆32Updated 9 years ago
- Software to assemble contigs/scaffolds into chromosomes using Hi-C data☆28Updated 5 months ago
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆58Updated 4 months ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated 5 months ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 6 years ago
- ☆28Updated 2 months ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆27Updated 5 years ago
- ☆33Updated last year
- DNA multiple sequence aligner, official version from Penn State's Miller Lab☆31Updated 5 years ago
- Genotyping of segregating mobile elements insertions☆19Updated 3 years ago
- R package for DNA methylation analysis☆17Updated 6 months ago