NuttyLogic / BSBoltLinks
BiSulfite Bolt - A Bisulfite Sequencing Alignment and Processing Tool
☆24Updated 2 years ago
Alternatives and similar repositories for BSBolt
Users that are interested in BSBolt are comparing it to the libraries listed below
Sorting:
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- Long read to rMATS☆32Updated 2 years ago
- Evolutionary Transcriptomics with R☆49Updated last week
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆64Updated last year
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆28Updated 6 years ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated last year
- Long-read Isoform Quantification and Analysis☆38Updated 7 months ago
- ☆23Updated 11 months ago
- TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.☆48Updated 3 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 4 months ago
- A software for calculating telomere length☆72Updated 7 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 6 months ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- ☆20Updated 3 years ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated 2 weeks ago
- ☆38Updated 2 years ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆36Updated 2 years ago
- ☆37Updated last year
- Suite of command-line software for high-performance graphical analysis of ChIP-seq/RNA-seq/ATAC-seq data☆19Updated 3 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 7 months ago
- Tools for processing and analyzing structural variants.☆33Updated 10 years ago
- ☆34Updated last week
- Software to assemble contigs/scaffolds into chromosomes using Hi-C data☆28Updated last year
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆29Updated 6 years ago
- ☆37Updated 6 years ago
- Pipeline for structural variation detection in cohorts☆52Updated 4 years ago
- Pipeline to identify isoforms from full-length cDNA sequencing data☆25Updated last month
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Updated 4 years ago
- Structural variant merging tool☆55Updated last year