Alternatives and similar repositories for CD-MRG-metabolomics_summerschool_2023:

Users that are interested in CD-MRG-metabolomics_summerschool_2023 are comparing it to the libraries listed below

• Functional-Metabolomics-Lab / FBMN-STATS
  FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks
  ☆36Updated last week
• robinschmid / microbe_masst
  Using MASST or fastMASST, adding metadata onto a tree ontology for microbes
  ☆18Updated this week
• mmzdouc / FERMO
  Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.
  ☆33Updated 4 months ago
• tiagolbiotech / NPOmix_python
  ☆13Updated last year
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆44Updated 5 months ago
• CCMS-UCSD / GNPS_Workflows
  Public Workflows at GNPS
  ☆59Updated last year
• biosustain / snakemake_UmetaFlow
  Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake
  ☆25Updated last month
• jorainer / metabolomics2018
  Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.
  ☆27Updated last year
• systemsomicslab / mtbinfo.github.io
  ☆26Updated 7 months ago
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated 11 months ago
• mwang87 / MassQueryLanguage
  The Mass Spec Query Language (MassQL) is a domain specific language meant to be a succinct way to express a query in a mass spectrometry …
  ☆40Updated 2 months ago
• biocore / q2-qemistree
  Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".
  ☆32Updated last year
• madeleineernst / pyMolNetEnhancer
  ☆20Updated last year
• antonvsdata / notame
  An R package for non-targeted LC-MS metabolomics
  ☆17Updated 5 months ago
• allie-walker / Natural-product-function
  scripts for predicting natural product activity from biosynthetic gene cluster sequences
  ☆23Updated 2 years ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• computational-metabolomics / dimspy
  Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data
  ☆19Updated last year
• LiChenPU / NetID
  A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery
  ☆45Updated last year
• nf-core / metaboigniter
  Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.
  ☆19Updated last month
• mwang87 / GNPS_MASST
  ☆12Updated this week
• RASpicer / MetabolomicsTools
  ☆55Updated 3 years ago
• NPLinker / nplinker
  A python framework for microbial natural products data mining by integrating genomics and metabolomics data
  ☆18Updated this week
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆13Updated last year
• rickhelmus / patRoon
  Workflow solutions for mass-spectrometry based non-target analysis.
  ☆65Updated this week
• ccdmb / BioDendro
  A package to cluster and visualise MS/MS spectral data
  ☆11Updated 4 years ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆25Updated this week
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆45Updated last week
• DorresteinLaboratory / Bioactive_Molecular_Networks
  Bioactive Molecular Networks Project
  ☆14Updated 4 years ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆40Updated 9 months ago
• HuanLab / BUDDY
  Bottom-up MS/MS interrogation & Experiment-specific global annotation
  ☆28Updated 2 months ago