A package for making MuE observation models in Edward2.
☆13Jun 10, 2021Updated 4 years ago
Alternatives and similar repositories for MuE
Users that are interested in MuE are comparing it to the libraries listed below
Sorting:
- This repository is for the paper "A generative nonparametric Bayesian model for whole genomes"☆14Jun 7, 2023Updated 2 years ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Apr 10, 2023Updated 2 years ago
- ☆16May 13, 2022Updated 3 years ago
- Variational Bayes for discrete undirected models☆11Aug 7, 2017Updated 8 years ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆14Jun 13, 2023Updated 2 years ago
- MEME motif-based sequence analysis tools (http://meme-suite.org), with FreeBSD tweaks☆15Jul 26, 2017Updated 8 years ago
- Python module to analyse CRISPR-based libraries☆13Apr 1, 2021Updated 4 years ago
- Mutation effects predicted from sequence co-variation☆74Sep 3, 2017Updated 8 years ago
- NGS duplicate marking☆19Apr 6, 2021Updated 4 years ago
- Very large scale k-mer counting and analysis on Apache Spark.☆18Feb 22, 2026Updated last week
- ☆20Jun 10, 2024Updated last year
- University of Cambridge PhD thesis☆16Jan 8, 2021Updated 5 years ago
- ☆19Mar 24, 2023Updated 2 years ago
- This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022☆24Feb 21, 2022Updated 4 years ago
- An RNA virus strain-level identification tool for short reads.☆23Jan 29, 2026Updated last month
- A Unified Genealogy of Modern and Ancient Humans☆20Dec 10, 2025Updated 2 months ago
- ☆11Jul 3, 2022Updated 3 years ago
- ☆22Sep 17, 2025Updated 5 months ago
- Annotation and segmentation of MAS-seq data☆20May 25, 2023Updated 2 years ago
- A project to capture biological pathway data from academic papers☆29Mar 24, 2025Updated 11 months ago
- methods for orphan gene prediction paper optimization☆25Dec 24, 2021Updated 4 years ago
- Protein design and variant prediction using autoregressive generative models☆120Jan 23, 2024Updated 2 years ago
- Analyze NGS data for CRISPR (or any engineered endonuclease) activity and screen for clones. Screen for NHEJ or multiple HDR events concu…☆28Aug 8, 2023Updated 2 years ago
- ☆28Oct 3, 2023Updated 2 years ago
- Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of …☆39Mar 27, 2025Updated 11 months ago
- ☆20Oct 4, 2022Updated 3 years ago
- ☆33Sep 19, 2025Updated 5 months ago
- DeepMP is a computational tool to detect DNA modifications in Nanopore sequencing data☆28Mar 18, 2022Updated 3 years ago
- A single cell sequencing read simulator.☆34Oct 14, 2024Updated last year
- Large-scale automatic feature selection for biomarker discovery in high-dimensional OMICs data☆32Jul 18, 2025Updated 7 months ago
- antimicrobial peptide prediction in R☆33Dec 17, 2024Updated last year
- Cell Heterogeneity Accounted cLonal Methylation (CHALM)☆10Jul 6, 2021Updated 4 years ago
- ☆34Dec 2, 2020Updated 5 years ago
- KDS software for Kinase Drug Selectivity☆11Jun 8, 2023Updated 2 years ago
- A single-cell transcriptomic analysis of endometriosis, endometriomas, eutopic endometrial samples and uninvolved ovary tissues highlight…☆18Jan 12, 2023Updated 3 years ago
- Course materials for the Advanced Courses Working With Pathogen Genomes course run virtually in Asia 10-14 May 2021☆10Jul 5, 2024Updated last year
- ☆10Aug 29, 2023Updated 2 years ago
- Code for WHO Global Tuberculosis Report 2023☆14Jan 8, 2024Updated 2 years ago
- Pipeline for Nanopore sequencing: demultiplexing, variant calling, and quality visualization with error handling.☆11Jan 25, 2026Updated last month