mohimanilab / MetaMinerLinks
a metabologenomic pipeline integrating metabolomic and genomic data to identify novel RiPPs and their BGCs
☆13Updated 3 years ago
Alternatives and similar repositories for MetaMiner
Users that are interested in MetaMiner are comparing it to the libraries listed below
Sorting:
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…☆21Updated last year
- A manually curated database of human gut metabolic modules.☆18Updated 6 years ago
- Quickly find and score consensus between metabolite identifications and gene annotations☆18Updated 7 months ago
- ☆31Updated 4 years ago
- The Mouse Gastrointestinal Bacteria Catalogue☆15Updated 3 years ago
- Integrated Machine Learning for Multi-omics Classification and Prediction☆21Updated 2 weeks ago
- Microbiome research☆21Updated 3 years ago
- ☆13Updated 2 months ago
- Mutation tracker for microbial genomes☆15Updated 4 years ago
- Python wrapper for ipath3☆10Updated last year
- Single sample pathway analysis tools for omics data☆12Updated 8 months ago
- pathway based data integration and visualization☆41Updated 3 months ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- Prepare Sailfish and Salmon output for downstream analysis☆43Updated 6 years ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆16Updated 8 months ago
- PanGenomePipeline☆16Updated last year
- Tools Databases Resources in Metabolomics & Integrated Omics in 2015-2016☆12Updated 5 years ago
- interactive plots for differential expression analysis☆32Updated 3 weeks ago
- FREE Divergence Error-Correcting DNA Barcodes☆9Updated 7 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆11Updated 4 years ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆20Updated last year
- Proteomics label-free quantification (LFQ) analysis pipeline☆35Updated 6 months ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆34Updated last year
- ☆25Updated 4 years ago
- FunctionaL Omics Processing platform☆13Updated 11 months ago
- a toolbox for metabolomic data analysis, visualization and ‘omic’ integration☆13Updated 7 years ago
- ☆12Updated 7 years ago
- phylogenetic analyses informed by deep mutational scanning data☆15Updated last year
- NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization☆32Updated 5 years ago
- Re-analysis of data provided by Gihawi et al. 2023 bioRxiv☆26Updated last year