Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
☆25Jan 26, 2024Updated 2 years ago
Alternatives and similar repositories for scMET
Users that are interested in scMET are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Bayesian Clustering and Imputation of Single Cell Methylomes☆16Jul 16, 2020Updated 5 years ago
- A Bioconductor R package for detecting cell-to-cell variably methylated regions (VMRs) from single-cell bisulfite sequencing leveraging p…☆10Jul 13, 2025Updated 10 months ago
- Modelling DNA methylation profiles☆24Jul 16, 2020Updated 5 years ago
- ☆13Oct 2, 2019Updated 6 years ago
- Bayesian modelling approach for detecting RNA flexibility changes in high-throughput structure probing data under different conditions, b…☆11Dec 8, 2022Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Differential methylation: Easy, Fast, Identification and ANnoTation☆19Dec 18, 2020Updated 5 years ago
- Bioconductor components for general cancer genomics☆11Feb 5, 2023Updated 3 years ago
- countsimQC - Compare characteristic features of count data sets☆30Apr 28, 2026Updated last month
- Visualising single-cell trajectories, including comparisons between two models 📈☆32Dec 9, 2021Updated 4 years ago
- allele specific DNA methylation haplotype region☆13Oct 18, 2023Updated 2 years ago
- Readme☆10Mar 15, 2020Updated 6 years ago
- Generate Novel Insights from Gene Correlation Data☆14Jun 27, 2022Updated 3 years ago
- scNMT-seq gastrulation☆42Feb 8, 2023Updated 3 years ago
- Virus Protein Structural Analysis Toolkit☆13Sep 9, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Contrastive Poisson latent variable models (CPLVMs)☆11Feb 7, 2022Updated 4 years ago
- PyTorch implementation of BasisVAE: Translation-invariant feature-level clustering with Variational Autoencoders☆42Mar 16, 2020Updated 6 years ago
- HGNC Comparison of Orthology Predictions (HCOP)☆15Mar 22, 2018Updated 8 years ago
- Long RNA-seq analysis workflow☆23Oct 13, 2025Updated 7 months ago
- ☆15Aug 22, 2016Updated 9 years ago
- Distributed Deep Learning Tutorial☆21Mar 10, 2026Updated 3 months ago
- A collection of tumour microenvironment single-cell RNA sequencing datasets for use in R and other pipelines.☆21Jul 28, 2025Updated 10 months ago
- R bindings for Google's s2 library for geometry on the sphere☆30Aug 16, 2019Updated 6 years ago
- Probabilistic PCA which is applicable also on data with missing values. Missing value estimation is typically better than NIPALS but also…☆15Jun 13, 2019Updated 6 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Information Constraints on Auto-Encoding Variational Bayes☆11May 24, 2018Updated 8 years ago
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆57Mar 12, 2026Updated 2 months ago
- Code for performing PCA followed by CCA☆18Dec 2, 2018Updated 7 years ago
- ☆15May 24, 2022Updated 4 years ago
- ☆12Aug 21, 2025Updated 9 months ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Apr 7, 2026Updated 2 months ago
- RNA-seq Quantification of Alternative Polyadenylation☆53Mar 21, 2026Updated 2 months ago
- scOpen: single-cell open chromatin analysis via NMF modelling☆28Feb 4, 2023Updated 3 years ago
- A Python package for jointly analyzing multimodal single-cell sequencing data☆26Jan 17, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Gaussian processes in TensorFlow via R☆16Sep 10, 2017Updated 8 years ago
- ☆10Mar 11, 2025Updated last year
- Nextflow + Docker tutorial material☆25Oct 24, 2017Updated 8 years ago
- Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"☆14Apr 1, 2020Updated 6 years ago
- My presentation at RStudio::conf(2019), Austin, Tx - "The lazy and easily distracted report writer"☆17Feb 5, 2019Updated 7 years ago
- R package to read ImageJ ROI files☆12Aug 17, 2024Updated last year
- Model-based tumour subclonal deconvolution using population genetics☆36Dec 2, 2025Updated 6 months ago