cruk-mi / mesaLinks
mesa package for Methylation Enrichment Sequencing Analysis
☆12Updated last week
Alternatives and similar repositories for mesa
Users that are interested in mesa are comparing it to the libraries listed below
Sorting:
- Whole genome workflows☆12Updated 9 months ago
- ☆12Updated 4 years ago
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆14Updated 6 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Updated 5 years ago
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Updated 2 years ago
- ☆10Updated 3 years ago
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Updated 4 years ago
- Package to design primers for MutaSeq and related methods☆11Updated 4 years ago
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆14Updated last month
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- A pipeline for Smooth-seq data analysis.☆10Updated 3 years ago
- ☆11Updated 2 years ago
- ☆10Updated 2 years ago
- End-guided RNA assembler☆15Updated 2 weeks ago
- ☆11Updated 7 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated 2 years ago
- R Package for phasing of single cell Strand-seq data☆10Updated 7 months ago
- Detecting cancer subtypes with machine learning.☆10Updated 5 years ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆16Updated 3 years ago
- Integrated Genome Modeling (IGM): multi-modal data-driven simulator of genome structures☆12Updated 2 years ago
- ☆11Updated 3 months ago
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Updated 4 years ago
- Perturb-seq analysis package☆14Updated last year
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Updated 2 years ago
- Custom scripts used in "Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus"☆11Updated 4 years ago
- DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…☆14Updated last year
- The EnsembleVariantCallingPipeline takes files in FASTQ or BAM format and performs SNV and INDEL variant calling from 4 variant callers (…☆13Updated last month
- ☆10Updated 5 months ago
- GENome Organisation Visual Analytics☆16Updated 3 years ago
- SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA re…☆20Updated 2 weeks ago