A novel pipeline framework to accelerate bioinformatics analysis
☆31Oct 4, 2026Updated last week
Alternatives and similar repositories for BioQueue
Users that are interested in BioQueue are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Framework for running text mining tools on latest publications. Main page at:☆15Jul 13, 2022Updated 4 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆39Jul 10, 2024Updated 2 years ago
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- A workflow assembler for cancer genome analytics and informatics☆19Nov 16, 2016Updated 9 years ago
- Clin-mNGS: Automated pipeline for pathogen detection from clinical metagenomic data☆19Jun 29, 2021Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A pan-cancer genome-wide analysis reveals tumour dependencies by induction of nonsense-mediated decay☆15Nov 2, 2020Updated 5 years ago
- Application for hosting gene expression and ontology data with Shiny☆17Jan 8, 2018Updated 8 years ago
- cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.☆19Mar 2, 2023Updated 3 years ago
- MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.☆15Jul 23, 2020Updated 6 years ago
- Documents used for workshops on single cell analysis☆27Feb 5, 2017Updated 9 years ago
- ☆16Sep 16, 2026Updated 3 weeks ago
- myVCF: a web-based platform for target and exome mutations data management☆21Apr 13, 2021Updated 5 years ago
- Create a citation graph from pubmed data using R☆10Nov 4, 2016Updated 9 years ago
- ☆12Dec 22, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- the Sampa group website☆10Oct 1, 2021Updated 5 years ago
- Multiple sequence alignment browser☆12Dec 12, 2022Updated 3 years ago
- Toil workflows for common genomic pipelines☆33Oct 3, 2019Updated 7 years ago
- Analysis Pipeline to analyze Nanopore RNAseq data☆29Mar 1, 2022Updated 4 years ago
- a Python 3 command-line tool to maintain a DB mirror of MEDLINE (https://pypi.python.org/pypi/medic) - ALERT: As I have moved out of scie…☆25Sep 28, 2015Updated 11 years ago
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆53Jun 30, 2023Updated 3 years ago
- R packaged for Alpine Linux☆10Dec 10, 2017Updated 8 years ago
- python module for querying the vicc knowledgebase integration datastore☆11Jul 6, 2023Updated 3 years ago
- Ultrafast VCF GenoType Compressor (GTC) with instant random access, shrinking the 4.3 TB HRC dataset (27k samples, 40M variants) down to …☆16Oct 5, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Set of tools for viral metagenomics.☆18Aug 17, 2026Updated last month
- Tool for analysing viral diversity from High Throughput Sequencing☆12Nov 20, 2025Updated 10 months ago
- Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.☆12Aug 25, 2024Updated 2 years ago
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆13Aug 11, 2026Updated 2 months ago
- public production version of sequin to share with the public☆11Jun 12, 2026Updated 4 months ago
- ☆13May 25, 2025Updated last year
- JBrowse plugin that supports smallRNA alignments☆12Apr 8, 2019Updated 7 years ago
- Use batch balanced KNN (BBKNN) in R☆14Sep 9, 2025Updated last year
- Fastq compression☆19Oct 3, 2019Updated 7 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆11Jun 23, 2017Updated 9 years ago
- Main codes for AD epigenetics paper by Nativio et al.☆11Dec 7, 2019Updated 6 years ago
- ☆14Jan 7, 2024Updated 2 years ago
- Python client for GA4GH htsget protocol☆15Nov 7, 2022Updated 3 years ago
- Software and analysis of metabolism studies across multiple cancer types☆11Sep 5, 2017Updated 9 years ago
- Beginning of a textbook for shell skills for bioinformatics☆11Oct 7, 2025Updated last year
- DISCOVER co-occurrence and mutual exclusivity analysis for cancer genomics data☆34May 1, 2025Updated last year