A novel pipeline framework to accelerate bioinformatics analysis
☆31Oct 5, 2025Updated 6 months ago
Alternatives and similar repositories for BioQueue
Users that are interested in BioQueue are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Framework for running text mining tools on latest publications. Main page at:☆15Jul 13, 2022Updated 3 years ago
- A workflow assembler for cancer genome analytics and informatics☆19Nov 16, 2016Updated 9 years ago
- A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.☆36Jul 10, 2024Updated last year
- A pan-cancer genome-wide analysis reveals tumour dependencies by induction of nonsense-mediated decay☆15Nov 2, 2020Updated 5 years ago
- [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0☆75Nov 18, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Clin-mNGS: Automated pipeline for pathogen detection from clinical metagenomic data☆18Jun 29, 2021Updated 4 years ago
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.☆19Mar 2, 2023Updated 3 years ago
- Application for hosting gene expression and ontology data with Shiny☆17Jan 8, 2018Updated 8 years ago
- MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.☆15Jul 23, 2020Updated 5 years ago
- variant integration methods for the 1000 Genomes Project☆21Jan 16, 2018Updated 8 years ago
- myVCF: a web-based platform for target and exome mutations data management☆21Apr 13, 2021Updated 5 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- Toil workflows for common genomic pipelines☆33Oct 3, 2019Updated 6 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Multiple sequence alignment browser☆11Dec 12, 2022Updated 3 years ago
- Analysis Pipeline to analyze Nanopore RNAseq data☆29Mar 1, 2022Updated 4 years ago
- R packaged for Alpine Linux☆10Dec 10, 2017Updated 8 years ago
- ☆13Apr 22, 2021Updated 4 years ago
- Tool for analysing viral diversity from High Throughput Sequencing☆12Nov 20, 2025Updated 4 months ago
- python module for querying the vicc knowledgebase integration datastore☆11Jul 6, 2023Updated 2 years ago
- ☆11Dec 22, 2025Updated 3 months ago
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆12Feb 25, 2026Updated last month
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆50Jun 30, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Fastq compression☆19Oct 3, 2019Updated 6 years ago
- public production version of sequin to share with the public☆11Jan 6, 2025Updated last year
- GenoTypes Compressor☆16May 19, 2022Updated 3 years ago
- JBrowse plugin that supports smallRNA alignments☆12Apr 8, 2019Updated 7 years ago
- file command's magic pattern file for bioinformatics☆21Nov 25, 2015Updated 10 years ago
- ☆11May 25, 2025Updated 10 months ago
- ☆11Jun 23, 2017Updated 8 years ago
- DISCOVER co-occurrence and mutual exclusivity analysis for cancer genomics data☆32May 1, 2025Updated 11 months ago
- Use batch balanced KNN (BBKNN) in R☆13Sep 9, 2025Updated 7 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆12Apr 17, 2024Updated last year
- Beginning of a textbook for shell skills for bioinformatics☆11Oct 7, 2025Updated 6 months ago
- Main codes for AD epigenetics paper by Nativio et al.☆11Dec 7, 2019Updated 6 years ago
- Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.☆11Aug 25, 2024Updated last year
- omics data analysis using clusterProfiler ;)☆15Jun 6, 2024Updated last year
- ☆11Oct 8, 2021Updated 4 years ago
- Common Workflow Language definition files for workflows introduced in DAT2☆11May 23, 2022Updated 3 years ago