Alternatives and similar repositories for NextflowWorkbench:

Users that are interested in NextflowWorkbench are comparing it to the libraries listed below

• BioInterchange / Ontologies
  Home of the Genomic Feature and Variation Ontology (GFVO)
  ☆16Updated 4 years ago
• common-workflow-library / legacy
  Deprecated
  ☆100Updated 5 years ago
• JaneliaSciComp / nextflow-spark
  ☆14Updated 2 weeks ago
• yvdriess / precipes
  Parallel Recipes : parallel workflow execution made easy
  ☆13Updated 9 years ago
• common-workflow-lab / python-cwlgen
  Generation of CWL programmatically. Available types: CommandLineTool and DockerRequirement
  ☆29Updated 4 years ago
• yakneens / butler
  Butler is a framework for running scientific workflows on public and academic clouds.
  ☆69Updated 5 years ago
• Novartis / yap
  High throughput, pain-free big data pipelines.
  ☆30Updated 8 years ago
• ENCODE-DCC / snovault
  The SnoVault general purpose hybrid object-relational database
  ☆16Updated last year
• BD2KGenomics / cgcloud
  Image and VM management for Jenkins, Spark and Mesos clusters in EC2
  ☆22Updated 4 years ago
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 3 years ago
• ga4gh / task-execution-server
  ☆11Updated 8 years ago
• StanfordBioinformatics / loom
  A tool for running bioinformatics workflows locally or in the cloud.
  ☆30Updated 5 years ago
• sjackman / docker-bio
  Docker images of bioinformatics software
  ☆21Updated 7 years ago
• pcingola / BigDataScript
  BigDataScript: Scirpting language for big data
  ☆92Updated 4 years ago
• adamstruck / cwl2wdl
  Convert CWL to WDL
  ☆17Updated 8 years ago
• johandahlberg / piper
  A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…
  ☆21Updated 8 years ago
• ga4gh / htsget
  Python client for GA4GH htsget protocol
  ☆15Updated 2 years ago
• NLeSC / scriptcwl
  Create cwl workflows by writing a simple Python script
  ☆40Updated 4 years ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆40Updated last year
• nmdp-bioinformatics / ngs
  Next generation sequencing (NGS/HTS) tools.
  ☆18Updated last year
• amplab / smash
  Benchmarking toolkit for variant calling
  ☆47Updated 4 years ago
• bmeg / funnel-client
  Trigger the Google Genomics Pipeline API with CWL
  ☆11Updated 8 years ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 6 years ago
• marcbux / Hi-WAY
  Heterogeneity-incorporating Workflow ApplicationMaster for YARN
  ☆26Updated 7 years ago
• oncojs / lolliplot
  Chart to aid in understanding mutations and their location on a gene.
  ☆22Updated 2 years ago
• EliLillyCo / pytest-wdl
  WDL plugin for pytest
  ☆48Updated last year
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 5 years ago
• molpopgen / BigDataFormats
  Tutorial on programming or "big data"/bioinformatics
  ☆32Updated 7 years ago
• common-workflow-language / cwlviewer
  A web application to view and share Common Workflow Language workflows
  ☆46Updated this week
• arq5x / piledriver
  Basic, no assumptions, multi-pileup
  ☆24Updated 11 years ago