rabix / composer

Related projects ⓘ

Alternatives and complementary repositories for composer

• Barski-lab / cwl-airflow
  Python package to extend Airflow functionality with CWL1.1 support
  ☆185Updated last year
• rabix / cwl-svg
  A library for generating an interactive SVG visualization of CWL workflows
  ☆75Updated 3 months ago
• common-workflow-language / cwltool
  Common Workflow Language reference implementation
  ☆336Updated this week
• chanzuckerberg / miniwdl
  Workflow Description Language developer tools & local runner
  ☆177Updated 3 months ago
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆82Updated last month
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆121Updated this week
• rabix / bunny
  [Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0
  ☆74Updated 4 years ago
• arvados / arvados
  An open source platform for managing and analyzing biomedical big data
  ☆400Updated this week
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆70Updated 3 months ago
• ga4gh / task-execution-schemas
  ☆82Updated last week
• datirium / cwl-airflow-parser
  Package to extend Airflow functionality with CWL v1.0 support
  ☆12Updated 5 years ago
• bgruening / docker-galaxy
  Docker Images tracking the stable Galaxy releases.
  ☆226Updated this week
• openwdl / wdl
  Workflow Description Language - Specification and Implementations
  ☆776Updated last month
• rabix / benten
  A language server for Common Workflow Language
  ☆67Updated 11 months ago
• DataBiosphere / toil
  A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
  ☆901Updated this week
• elixir-cloud-aai / cwl-WES
  Trigger CWL workflows via GA4GH WES and TES
  ☆16Updated 3 months ago
• common-workflow-language / common-workflow-language
  Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊
  ☆1,455Updated 3 months ago
• rabix / rabix
  [Historical] Reproducible Analyses for Bioinformatics
  ☆106Updated 5 years ago
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆76Updated 4 months ago
• broadinstitute / wdl-ide
  Rich IDE support for Workflow Description Language
  ☆42Updated 4 months ago
• googlegenomics / dockerflow
  Dockerflow is a workflow runner that uses Dataflow to run a series of tasks in Docker with the Pipelines API
  ☆97Updated 7 years ago
• seqeralabs / nf-tower
  Nextflow Tower system
  ☆147Updated last year
• common-workflow-language / workflow-service
  Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows
  ☆36Updated 4 months ago
• nextflow-io / awesome-nextflow
  A curated list of nextflow based pipelines
  ☆572Updated 2 years ago
• assemblerflow / flowcraft
  FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.
  ☆241Updated 4 years ago
• common-workflow-language / schema_salad
  Semantic Annotations for Linked Avro Data
  ☆73Updated this week
• common-workflow-library / legacy
  Deprecated
  ☆100Updated 5 years ago
• broadinstitute / cromwell
  Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale product…
  ☆997Updated this week
• BioDepot / BioDepot-workflow-builder
  GUI for creating bioinformatics workflows from Docker containers:
  ☆64Updated last week
• NLeSC / scriptcwl
  Create cwl workflows by writing a simple Python script
  ☆40Updated 4 years ago