Alternatives and similar repositories for DEprior:

Users that are interested in DEprior are comparing it to the libraries listed below

• montilab / hypeR
  An R Package for Geneset Enrichment Workflows
  ☆76Updated 3 weeks ago
• jessemzhang / tn_test
  post-clustering differential expression test
  ☆35Updated 5 years ago
• HelenaLC / muscat-comparison
  ☆12Updated 11 months ago
• randel / MIND
  Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution
  ☆45Updated last year
• wmacnair / SampleQC
  Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data
  ☆37Updated 2 years ago
• oganm / homologene
  An r package that works as a wrapper to homologene
  ☆44Updated last year
• skinnider / dismay
  Calculation of distance metrics for matrices
  ☆25Updated 6 years ago
• waldronlab / HGNChelper
  Identify and correct invalid gene symbols
  ☆58Updated 4 months ago
• PoolLab / generecovery
  ☆29Updated 2 years ago
• chlbaron / GateID
  Cell type purification by single-cell transcriptome-trained sorting
  ☆14Updated 5 years ago
• Shians / CellBench
  R package for benchmarking single cell analysis methods
  ☆31Updated last year
• francescojm / ADAM
  Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens
  ☆22Updated 6 years ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 5 years ago
• shenorrLabTRDF / cellAlign
  ☆40Updated 4 years ago
• MonashBioinformaticsPlatform / celaref
  ☆14Updated 5 years ago
• statOmics / zinbwaveZinger
  Integrating zingeR with ZINB-WaVE weights
  ☆24Updated 7 years ago
• LTLA / SingleCellThoughts
  Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.
  ☆44Updated 4 years ago
• caleblareau / bap
  Bead-based single-cell atac processing
  ☆33Updated 3 years ago
• kevinrue / velociraptor
  Toolkit for Single-Cell Velocity
  ☆55Updated 3 months ago
• ctlab / LinSeed
  Linseed: LINear Subspace identification for gene Expresion Deconvolution
  ☆29Updated 5 years ago
• hms-dbmi / scw
  HSCI/Catalyst Single-cell RNA-Seq Workshop
  ☆19Updated 6 years ago
• LTLA / batchelor
  Clone of the Bioconductor repository for the batchelor package.
  ☆16Updated last month
• cz-ye / DECENT
  Differential Expression with Capture Efficiency adjustmeNT
  ☆14Updated 2 years ago
• igrabski / scRNAseq-cell-type
  Probabilistic gene expression barcodes for cell type annotation
  ☆25Updated 2 years ago
• jgamache014 / snRNA-seq-workflow
  Human brain, >200,000 nuclei
  ☆24Updated 3 years ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated 2 years ago
• kdkorthauer / scDD
  R package to identify genes with differential distributions in single-cell RNA-seq
  ☆33Updated 3 years ago
• wmacnair / psupertime
  psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels
  ☆39Updated 2 years ago
• gjhunt / dtangle
  Cell type deconvolution from high-throughput gene expression profiling experiments.
  ☆31Updated 4 years ago
• crazyhottommy / scRNA-seq-workshop-Fall-2019
  Harvard FAS informatics scRNAseq workshop website
  ☆37Updated 5 years ago