Alternatives and similar repositories for DiffNetFDR

Users that are interested in DiffNetFDR are comparing it to the libraries listed below

• immunogenomics / cdr3-QTL
  Trans-association between HLA and TCR-CDR3
  ☆18Updated 2 years ago
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆21Updated 2 years ago
• myles-lewis / glmmSeq
  Gene-level general linear mixed model
  ☆23Updated last month
• haotian-zhuang / findPC
  Automatic selection of number of principal components
  ☆17Updated 3 years ago
• yigbt / multiGSEA
  The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.
  ☆20Updated 3 weeks ago
• nghiavtr / ISOP
  Isoform-level expression patterns in single-cell RNA-sequencing data
  ☆11Updated 2 years ago
• dcalderon / rolypoly
  Method for identifying trait-relevant gene annotations from GWAS summary statistics.
  ☆18Updated 3 years ago
• rujinwang / EPIC
  cEll tyPe enrIChment
  ☆15Updated 2 years ago
• MonashBioinformaticsPlatform / celaref
  ☆14Updated 6 years ago
• oliviasabik / RACER
  An R package for generating comparative regional association plots
  ☆18Updated last month
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated last year
• stephaniehicks / methylCC
  R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms
  ☆18Updated 3 years ago
• siddhartha-kar / clonal-hematopoiesis
  This is the repository accompanying the pre-print titled, "Genome-wide analyses of 200,453 individuals yield new insights into the causes…
  ☆13Updated 3 years ago
• bhattacharya-a-bt / MOSTWAS
  Multi-Omic Strategies for TWAS
  ☆13Updated 2 years ago
• boutroslab / Supplemental-Material
  Repository for supplemental material of manuscripts
  ☆18Updated 4 years ago
• Core-Bioinformatics / bulkAnalyseR
  ☆29Updated 2 years ago
• Sarah145 / CCPlotR
  An R package for visualising cell-cell interactions
  ☆43Updated last year
• rnabioco / scraps
  Single-cell RNA Processing Software
  ☆11Updated 5 months ago
• hancockinformatics / pathlinkR
  Analysis and visualization of RNA-Seq results
  ☆30Updated 2 weeks ago
• Sun-lab / scRNAseq_pipelines
  pipelines to process scRNA-seq data
  ☆12Updated 4 years ago
• jokergoo / BioCartaImage
  BioCarta pathway images
  ☆11Updated 2 years ago
• korsunskylab / tessera
  ☆15Updated 2 months ago
• IMB-Computational-Genomics-Lab / ascend
  R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)
  ☆22Updated 6 years ago
• mm-shah / MetaNeighbor
  A method to rapidly assess cell type identity using both functional and random gene sets
  ☆13Updated 6 years ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆52Updated 2 months ago
• gjhunt / dtangle
  Cell type deconvolution from high-throughput gene expression profiling experiments.
  ☆31Updated 4 years ago
• natsuhiko / PHM
  Pairwise Hierarchical Model
  ☆20Updated 3 years ago
• juanbot / CoExpNets
  Co-expression network management based on WGCNA + k-means
  ☆21Updated 4 years ago
• Drinchai / BloodGen3Module
  This R package for performing module repertoire analyses and generating fingerprint representations
  ☆16Updated 4 years ago
• MCorentin / vargen
  VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…
  ☆17Updated last year