RHReynolds / LDSCforRytenView external linksLinks
S-LDSC scripts for use on MR server.
☆10Sep 23, 2021Updated 4 years ago
Alternatives and similar repositories for LDSCforRyten
Users that are interested in LDSCforRyten are comparing it to the libraries listed below
Sorting:
- ☆15Apr 20, 2021Updated 4 years ago
- Discovery of genetic variants with shared effect across multiple phenotypes from GWAS summary statistics☆14Oct 27, 2023Updated 2 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Jul 2, 2025Updated 7 months ago
- Software to infer latent pleiotropic components from GWAS summary data☆15Jan 30, 2025Updated last year
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆13Mar 14, 2019Updated 6 years ago
- Transcriptome-wide association study of Major Depressive Disorder☆12Sep 17, 2020Updated 5 years ago
- Tutorial for running Mendelian Randomization analysis using R☆35Apr 29, 2024Updated last year
- A software package for performing and visualising radial multivariable Mendelian randomization analyses☆12Nov 28, 2025Updated 2 months ago
- ☆13Jul 4, 2023Updated 2 years ago
- Pipeline for genetic epidemiology projects at Univsersity of Bristol☆15Dec 18, 2025Updated last month
- Find causal cell-types underlying complex trait genetics☆92Updated this week
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆24Sep 4, 2025Updated 5 months ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆39Sep 18, 2025Updated 4 months ago
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆60Oct 31, 2025Updated 3 months ago
- Integration of TWAS and Colocalization Analysis☆17Oct 29, 2024Updated last year
- Canonical SGE cluster genotype imputation pipeline☆12Jan 18, 2016Updated 10 years ago
- ☆20Sep 12, 2025Updated 5 months ago
- MR-link-2: pleiotropy robust cis MR☆21Aug 4, 2025Updated 6 months ago
- Code snippets for use in All of Us Workbench notebooks.☆18May 17, 2023Updated 2 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Aug 19, 2025Updated 5 months ago
- ☆21Nov 15, 2024Updated last year
- Leveraging functional information to improve GWAS summary statistic imputation☆19Aug 10, 2021Updated 4 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆28Jul 30, 2025Updated 6 months ago
- ☆24Jan 8, 2026Updated last month
- GENI plots to visualise results from genome-wide association studies☆31Oct 14, 2024Updated last year
- Brain-related -omics data☆27Jul 25, 2024Updated last year
- Hypothesis Prioritisation in multi-trait Colocalization☆55Apr 8, 2024Updated last year
- R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples☆67Jan 9, 2025Updated last year
- lhcMR☆26Mar 24, 2024Updated last year
- Pleiotropy-informed conditional and conjunctional false discovery rate☆36Jun 3, 2025Updated 8 months ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Sep 20, 2022Updated 3 years ago
- A powerful TWAS framework leveraging summary-level reference data☆32Apr 1, 2025Updated 10 months ago
- R script that performs gene-set or gene property analysis using TWAS results.☆32Sep 11, 2024Updated last year
- A collection of various utilities for GWAS summary statistics☆32May 14, 2024Updated last year
- ☆11Dec 15, 2025Updated last month
- An ensemble of functions for use analysing the UKBB records on DNA Nexus☆15Nov 6, 2025Updated 3 months ago
- ☆20May 6, 2025Updated 9 months ago
- ☆44May 16, 2025Updated 8 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆35Aug 28, 2020Updated 5 years ago