pnpnpn / dna2vecLinks
dna2vec: Consistent vector representations of variable-length k-mers
☆189Updated 3 years ago
Alternatives and similar repositories for dna2vec
Users that are interested in dna2vec are comparing it to the libraries listed below
Sorting:
- a framework for training sequence-level deep learning networks☆385Updated 9 months ago
- Model zoo for genomics☆168Updated last year
- A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences☆158Updated 8 years ago
- pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks☆86Updated 5 years ago
- Deep learning infrastructure for genomics☆257Updated 3 years ago
- Kipoi's model zoo API☆238Updated last year
- Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications☆63Updated 4 years ago
- For anyone who are eager to applying deep learning in bioinformatics!☆124Updated 6 years ago
- Deep learning for gene expression inference☆145Updated 6 years ago
- Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing☆173Updated last year
- Training and testing of DeepBind models.☆98Updated 9 years ago
- deep residual neural network for classifying the pathogenicity of missense mutations.☆115Updated 4 years ago
- Deep neural networks for predicting CpG methylation☆148Updated 5 years ago
- Convolutional neural network analysis for predicting DNA sequence activity.☆266Updated 5 years ago
- TF MOtif Discovery from Importance SCOres☆146Updated last year
- Toolkit to train base-resolution deep neural networks on functional genomics data and to interpret them☆163Updated last year
- predicting expression effects of human genome variants ab initio from sequence☆132Updated 7 months ago
- Python implementation of Basic Local Alignment Search Tool (BLAST) , which is the core algorithm in sequence alignment for genomes.☆75Updated last year
- A toolkit to learn how to model and interpret regulatory sequence data using deep learning.☆262Updated 2 years ago
- ☆107Updated 7 years ago
- NeuSomatic: Deep convolutional neural networks for accurate somatic mutation detection☆171Updated 3 years ago
- WebLogo 3: Sequence Logos redrawn☆152Updated 4 months ago
- ☆66Updated 2 years ago
- A deep learning package for predicting TF binding☆42Updated 5 years ago
- Peptide-MHC I binding affinity prediction☆215Updated 3 months ago
- "DeepDiff: Deep-learning for predicting Differential gene expression from histone modifications", Bioinformatics, Volume 34, Issue 17,☆21Updated 5 years ago
- Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl☆397Updated last month
- DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing☆31Updated 8 years ago
- Contains files for the deep learning in genomics primer.☆266Updated 6 years ago
- DCell browser and gene deletion simulator☆123Updated 2 years ago