Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding
☆15Nov 5, 2018Updated 7 years ago
Alternatives and similar repositories for ismb2017_lstm
Users that are interested in ismb2017_lstm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 6 years ago
- Implementation of IJCAI15 cascade cnn and LSTM for protein secondary structure prediction☆37May 21, 2017Updated 8 years ago
- A hybrid deep convolutional neural network for predicting chromatin accessibility☆25Apr 10, 2019Updated 7 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Jan 6, 2016Updated 10 years ago
- inferring sequence-structure motifs using deep learning☆40Aug 3, 2023Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆12Apr 3, 2022Updated 4 years ago
- R package for high-throughput DNA shape predictions and feature encoding☆20Jul 1, 2021Updated 4 years ago
- ☆21Mar 20, 2017Updated 9 years ago
- Inferring disease-associated miRNAs☆10Mar 21, 2020Updated 6 years ago
- This repository is for the replication of our published paper "Protein Secondary Structure Prediction Using Cascaded Convolutional and Re…☆13Nov 10, 2017Updated 8 years ago
- 论文基于注意力机制的卷积神经网络模型 源代码☆16Aug 22, 2017Updated 8 years ago
- Integrative orthogonal non-negative matrix factorization☆31Sep 29, 2019Updated 6 years ago
- ☆16Mar 3, 2023Updated 3 years ago
- CancerMIRNome - an interactive analysis and visualization database for miRNome profiles of human cancer☆12Aug 9, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆10Mar 19, 2020Updated 6 years ago
- ☆15May 3, 2024Updated 2 years ago
- The Shape of Data: Intrinsic Distance for Comparing Data Distributions☆12Sep 25, 2019Updated 6 years ago
- Kdrew's scripts for handling protein complex map data☆14Updated this week
- LSTM三分类问题☆10Nov 4, 2018Updated 7 years ago
- ☆10Jun 21, 2025Updated 10 months ago
- Code accompanying the paper "Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively…☆12Aug 26, 2021Updated 4 years ago
- MIT开发的支持整数向量的同态加密 支持向量的加法，乘法和内积☆15Jun 12, 2020Updated 5 years ago
- Leveraging Local and Global Patterns for Self-Attention Networks☆12Jun 3, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Predicting lncRNA-disease associations in heterogeneous network based on deep learning method.☆13May 11, 2020Updated 5 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Apr 19, 2019Updated 7 years ago
- Structural space exploration of AlphaFold DB☆12Oct 8, 2021Updated 4 years ago
- ☆16Jul 7, 2025Updated 10 months ago
- This repository is for the paper "A generative nonparametric Bayesian model for whole genomes"☆15Jun 7, 2023Updated 2 years ago
- COmplex Network Description Of Regulators, an R package for bipartite network analysis☆12Jul 5, 2019Updated 6 years ago
- Deep neural network for predicting methylation states of single cells☆13Jan 19, 2017Updated 9 years ago
- ☆10May 16, 2020Updated 5 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Oct 15, 2025Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Genomic sequence preprocessing toolkit☆13Jan 13, 2026Updated 3 months ago
- SNP and indel calls from multiple sequence alignment (MSA)☆13Nov 11, 2022Updated 3 years ago
- Calculate similarity with embedding☆11Jan 22, 2022Updated 4 years ago
- JOKES☆11Apr 16, 2023Updated 3 years ago
- single cell sequencing analysis tutorial☆18Jan 15, 2020Updated 6 years ago
- A package for making MuE observation models in Edward2.☆13Jun 10, 2021Updated 4 years ago
- ☆16Mar 7, 2025Updated last year