☆13Jul 5, 2019Updated 6 years ago
Alternatives and similar repositories for BiRen
Users that are interested in BiRen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Jan 6, 2016Updated 10 years ago
- Deep learning for identifying cis-regulatory elements and other applications☆34Nov 21, 2016Updated 9 years ago
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Feb 13, 2017Updated 9 years ago
- Training and testing of DeepSEA models.☆15Oct 19, 2015Updated 10 years ago
- ☆53Nov 14, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Code for NeurIPS 2024 paper "A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models"☆15Oct 17, 2024Updated last year
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆12Oct 16, 2025Updated 5 months ago
- ☆11Oct 6, 2017Updated 8 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- ☆12Nov 15, 2018Updated 7 years ago
- ☆14May 26, 2020Updated 5 years ago
- ☆11Feb 6, 2023Updated 3 years ago
- Deep learning for modeling gene regulatory network☆22Sep 5, 2021Updated 4 years ago
- pandasGWAS: a Python package for easy retrieval of GWAS Catalog data☆17Dec 19, 2025Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆30Jun 30, 2024Updated last year
- CliXO algorithm re-implemented☆16Nov 9, 2021Updated 4 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆10Sep 12, 2017Updated 8 years ago
- Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.☆16Apr 12, 2014Updated 11 years ago
- Repository for modeling PRO-cap data with the BPNet-like model, ProCapNet.☆20Aug 28, 2025Updated 7 months ago
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 9 years ago
- Evolution-inspired data augmentations for PyTorch-based models for regulatory genomics☆25Jun 3, 2025Updated 9 months ago
- Use gene expression to predict phenotype sample information☆19Feb 13, 2018Updated 8 years ago
- Categorical Variational Autoencoders☆24Feb 4, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A Generative Adversarial Network Model Alternative to Animal Studies for Clinical Pathology Assessment☆15Jan 10, 2024Updated 2 years ago
- ☆12Jan 31, 2023Updated 3 years ago
- Several maximum likelihood ICA algorithms, including Picard☆23Sep 13, 2017Updated 8 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Apr 19, 2019Updated 6 years ago
- Computational Optimization of DNA Activity (CODA)☆67Apr 3, 2025Updated 11 months ago
- Classifier of pathogenic non-coding variants in Mendelian diseases☆11Feb 6, 2020Updated 6 years ago
- R package for high-throughput DNA shape predictions and feature encoding☆20Jul 1, 2021Updated 4 years ago
- ☆10Oct 24, 2024Updated last year
- ☆13Updated this week
- NordVPN Threat Protection Pro™ • AdTake your cybersecurity to the next level. Block phishing, malware, trackers, and ads. Lightweight app that works with all browsers.
- Nanopore desc☆18Aug 22, 2016Updated 9 years ago
- ☆27Apr 15, 2025Updated 11 months ago
- ☆10Aug 29, 2023Updated 2 years ago
- GraphPart, a data partitioning method for ML on biological sequences☆33Oct 26, 2023Updated 2 years ago
- ☆28Mar 17, 2026Updated last week
- Prediction of mRNA subcellular localization using deep recurrent neural networks☆15Jul 19, 2019Updated 6 years ago
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆17Feb 10, 2023Updated 3 years ago