david-r-cox / Gene2vec
Vector space representation of genetic data
☆36Updated 8 years ago
Alternatives and similar repositories for Gene2vec:
Users that are interested in Gene2vec are comparing it to the libraries listed below
- Tools for munging genomic data☆21Updated 5 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Updated 9 years ago
- Simple and efficient access to genomic data for deep learning models.☆43Updated 5 years ago
- Deep Feature Interaction Maps (DFIM)☆53Updated 6 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Updated 6 years ago
- ☆21Updated 8 years ago
- Code and Data to accompany "Dilated Convolutions for Modeling Long-Distance Genomic Dependencies", presented at the ICML 2017 Workshop on…☆29Updated 7 years ago
- Understanding sequence conservation with deep learning☆20Updated 8 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Updated 6 years ago
- ☆12Updated 5 years ago
- DSDE Deep Learning Club☆40Updated 6 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆30Updated 7 years ago
- Flexible Integration of Data with Deep LEarning☆50Updated 2 years ago
- DEPRECATED: Store and query public TCGA data☆11Updated 8 years ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- Final project for CS224d☆9Updated 8 years ago
- Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications☆63Updated 4 years ago
- Code accompanying the publication for compressed graph annotation☆13Updated 6 years ago
- Deep learning for identifying cis-regulatory elements and other applications☆33Updated 8 years ago
- NeurIPS17: [AttentiveChrome] Attend and Predict: Using Deep Attention Model to Understand Gene Regulation by Selective Attention on Chrom…☆27Updated 4 years ago
- A deep learning package for predicting TF binding☆42Updated 5 years ago
- Python module for the easy handling and analysis of DNase-seq data☆37Updated 5 years ago
- ☆24Updated 3 years ago
- An unsupervised transfer learning approach for rare disease transcriptomics☆45Updated 5 years ago
- Amino-Acid Sequence Annotation Predictor (ASAP)☆25Updated 4 years ago
- kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths☆10Updated 7 years ago
- Sequence data label generation and ingestion into deep learning models☆12Updated 3 years ago
- An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data☆33Updated 2 years ago
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆32Updated 7 years ago
- Predict the boundary of transcript start and end from RNA-seq reads alignment☆11Updated 8 years ago