Vector space representation of genetic data
☆36Nov 18, 2016Updated 9 years ago
Alternatives and similar repositories for Gene2vec
Users that are interested in Gene2vec are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python module to read binary Plink files.☆17Mar 25, 2026Updated 3 weeks ago
- dna2vec: Consistent vector representations of variable-length k-mers☆192Jun 21, 2022Updated 3 years ago
- personal genome constructor☆10May 29, 2025Updated 10 months ago
- Extracting disease-specific genomic coordinates from GWAS catalog☆21Nov 29, 2019Updated 6 years ago
- Mapping NCBI Genbank accession to GTDB accession☆14Feb 13, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Very very long reads, indeed☆13Apr 30, 2017Updated 8 years ago
- Predict prokaryotic hosts for phage (meta) genomic sequences☆11Apr 4, 2022Updated 4 years ago
- Next-generation sequencing analysis pipelines & scrips☆10Nov 25, 2020Updated 5 years ago
- Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data☆33Oct 25, 2013Updated 12 years ago
- Neural networks for amino acid sequences☆22Feb 26, 2018Updated 8 years ago
- Embedding-based indexing for compact storage and rapid querying of bacterial pan-genomes☆21Dec 9, 2025Updated 4 months ago
- ☆12Apr 28, 2016Updated 9 years ago
- Code repository for our paper, "Medical Large Language Models are Vulnerable to Data Poisoning Attacks" (Nature Medicine, 2024).☆12Jan 5, 2025Updated last year
- A text analysis interface for the humanities☆27Jun 23, 2011Updated 14 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- This is the official implementation of TAGCOS: Task-agnostic Gradient Clustered Coreset Selection for Instruction Tuning Data☆13Jul 21, 2024Updated last year
- Collection of code for the GESTALT fate mapping paper using the CRISPR/Cas9 system☆24Jan 8, 2018Updated 8 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆15Feb 13, 2018Updated 8 years ago
- 🧮 🔢 Generate multi-sample k-mer count matrix from WGS☆11Jan 17, 2026Updated 3 months ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11Oct 8, 2021Updated 4 years ago
- Brief tutorial for using Snakemake to create and submit jobs on a HPC cluster.☆15Mar 22, 2022Updated 4 years ago
- Ebola virus surveillance☆15Aug 28, 2016Updated 9 years ago
- The Onion Name System - academic literature☆14Sep 1, 2016Updated 9 years ago
- mvabund updates☆10Mar 10, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python module for the easy handling and analysis of DNase-seq data☆37Jul 18, 2019Updated 6 years ago
- In this work, we use S-gene target failure (SGTF) as a proxy of variant status combined with reported case counts to explore the evidence…☆15Jul 15, 2022Updated 3 years ago
- Proteins as words, genomes as documents.☆19Nov 11, 2020Updated 5 years ago
- ⛰ covtobed | Convert the coverage track from a BAM file into a BED file☆44Nov 6, 2025Updated 5 months ago
- Antibiotic resistance predictions in minutes on a laptop☆50Mar 7, 2019Updated 7 years ago
- Delay differential equation solver☆18Sep 23, 2024Updated last year
- Reanalysis of the repressive capacity of promoter DNA methylation☆11Feb 14, 2019Updated 7 years ago
- Calculate similarity with embedding☆11Jan 22, 2022Updated 4 years ago
- This is the GitHub repository for our benchmarking study "Benchmarking of computational error-correction methods for next-generation sequ…☆12Mar 13, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- DeepCC: a novel deep learning-based framework for cancer molecular subtype classification☆21Dec 1, 2021Updated 4 years ago
- Slides, Code, and Exercises to support [R Quickstart tutorial](http://conferences.oreilly.com/strata/hadoop-big-data-ca/public/schedule/d…☆10Mar 25, 2016Updated 10 years ago
- SolveBio Python bindings☆20Updated this week
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆107Aug 2, 2023Updated 2 years ago
- Deep convolutional networks for fold recognition☆22Nov 8, 2019Updated 6 years ago
- GTEx analysis scripts☆20Mar 14, 2017Updated 9 years ago
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆11Aug 4, 2020Updated 5 years ago