perishky / meffilLinks
Efficient algorithms for analyzing DNA methylation data.
☆57Updated last month
Alternatives and similar repositories for meffil
Users that are interested in meffil are comparing it to the libraries listed below
Sorting:
- R package for quality control of plink genetic datasets☆59Updated this week
- Devel repository for minfi☆61Updated last year
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆99Updated 5 months ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆29Updated last year
- R package containing useful functions for mutational signature analysis☆86Updated last week
- RNA-seq workflow: exploratory analysis and differential expression☆80Updated 2 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆35Updated 7 years ago
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆61Updated 6 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆68Updated 3 weeks ago
- DNA methylation analysis notes from Ming Tang☆91Updated 6 years ago
- Differential Count Data Analysis Toolbox☆61Updated last year
- R package for genomic feature analysis and visualization☆79Updated 7 months ago
- Functional enrichment analysis of high-throughput omics data☆20Updated 10 months ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- Repository for resources we'd like to share with the community.☆25Updated 3 years ago
- Representation and manipulation of genomic intervals☆46Updated 2 weeks ago
- Identify and correct invalid gene symbols☆60Updated last year
- An R client for broads firehose pipeline, providing TCGA data sets☆61Updated 6 years ago
- combining p-values using modified stouffer-liptak for spatially correlated results (probes)☆46Updated 3 years ago
- Every Gene Ever Annotated in published GWAS☆49Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- MSigDB gene sets for multiple organisms in a tidy data format☆83Updated 3 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- EDA, QC, and DESeq2 / edgeR analysis of 109 RNA-seq samples of immunotherapy treatment☆55Updated 2 years ago
- R package providing query functionality to BioMart instances like Ensembl☆43Updated 2 weeks ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- An R for fast and flexible DNA methylation analysis☆34Updated last month
- Soon to be deprecated in favor of broadinstitute/warp github repo. Previously: Secondary analysis pipelines☆48Updated 8 months ago
- Summer school course materials collection☆27Updated 7 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆24Updated 4 months ago