MorganLevineLab / methylCIPHER

Related projects ⓘ

Alternatives and complementary repositories for methylCIPHER

• krumsieklab / maplet
  R statistical toolbox for metabolomics
  ☆17Updated last month
• GangLiLab / genekitr
  🧬 Gene analysis toolkit based on R
  ☆53Updated 2 months ago
• montilab / BS831
  Course Materials for Genomics Data Mining
  ☆22Updated 2 months ago
• CBIIT / LDlinkR
  LDlinkR
  ☆56Updated 7 months ago
• nasqar / ClusterProfShinyGSEA
  A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries
  ☆17Updated 4 years ago
• MRCIEU / metaboprep
  a pipeline of metabolomics data processing and quality control
  ☆25Updated 8 months ago
• jokergoo / cola
  A General Framework for Consensus Partitioning
  ☆59Updated 8 months ago
• waldronlab / HGNChelper
  Identify and correct invalid gene symbols
  ☆55Updated last week
• SUwonglab / rss-net
  RSS-NET: Regression with Summary Statistics exploiting Network Topology
  ☆18Updated 2 months ago
• shenlab-sinai / GeneOverlap
  R package for testing and visualizing gene list overlaps
  ☆18Updated 8 years ago
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆22Updated 3 years ago
• luciorq / isoformic
  Isoform-level functional RNA-Seq analysis 🧬
  ☆21Updated last week
• eudoraleer / scasa
  SCASA: Single cell transcript quantification tool
  ☆19Updated last year
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆37Updated 2 months ago
• grimbough / biomaRt
  R package providing query functionality to BioMart instances like Ensembl
  ☆36Updated 3 months ago
• montilab / hypeR
  An R Package for Geneset Enrichment Workflows
  ☆76Updated 5 months ago
• CompEpigen / methrix
  An R for fast and flexible DNA methylation analysis
  ☆30Updated 4 months ago
• YuLab-SMU / ggsc
  🧠 Visualizing Single Cell and Spatial Transcriptomics
  ☆43Updated 3 weeks ago
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆24Updated 8 months ago
• KechrisLab / multiMiR
  Development repository for the multiMiR database's R API
  ☆20Updated 2 months ago
• jtleek / sva-devel
  ☆28Updated 4 months ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆15Updated 5 years ago
• gersteinlab / exceRpt
  Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets
  ☆22Updated last year
• barkasn / fastSave
  Save and load your R sessions faster using parallel compression
  ☆23Updated 5 years ago
• juanbot / CoExpNets
  Co-expression network management based on WGCNA + k-means
  ☆17Updated 3 years ago
• sa-lee / superintronic
  A tidy interface for coverage analysis
  ☆24Updated 4 years ago
• hbctraining / Peak_analysis_workshop
  An introduction to various methods/approaches for the analysis of peaks generated from ChIP-seq / CUT&RUN / ATAC-seq
  ☆11Updated this week
• jokergoo / rGREAT
  GREAT Analysis - Functional Enrichment on Genomic Regions
  ☆85Updated 3 months ago
• pwwang / plotthis
  plotthis is an R package that is built upon ggplot2 and other plotting packages.
  ☆26Updated this week
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆42Updated 3 weeks ago