Preprocessing methylation pipeline, written in python. Easy to use and highly parallelized.
☆36Feb 11, 2020Updated 6 years ago
Alternatives and similar repositories for PyMethylProcess
Users that are interested in PyMethylProcess are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Modular framework for deep learning predictions on methylation data.☆56Jun 2, 2020Updated 5 years ago
- Python-based preprocessing software for Illumina methylation arrays☆42Aug 17, 2023Updated 2 years ago
- A new extended cell deconvolution for peripheral blood☆18Feb 28, 2025Updated last year
- Python-based Illumina methylation array analysis software☆16Jan 25, 2024Updated 2 years ago
- Efficient algorithms for analyzing DNA methylation data.☆58Jan 22, 2026Updated 2 months ago
- ☆26Sep 23, 2025Updated 6 months ago
- An automated workflow to create disease-specific Knowledge Graphs☆21Aug 21, 2025Updated 7 months ago
- Epigenetic Smoking status Estimator☆10Nov 24, 2020Updated 5 years ago
- A transposition caller.☆12Oct 5, 2023Updated 2 years ago
- Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis☆30May 2, 2024Updated last year
- Personal experiments and implementation examples of deep learning papers.☆11Jan 23, 2018Updated 8 years ago
- A Java package for non-invasive cancer diagnosis using methylation profiles of cell-Free DNA.☆16Apr 2, 2019Updated 6 years ago
- cfDNA Sequencing Pipeline with UMI☆11Dec 8, 2025Updated 3 months ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Jul 7, 2023Updated 2 years ago
- ☆54Mar 9, 2022Updated 4 years ago
- Paper discribing LDpred2☆16Oct 20, 2022Updated 3 years ago
- ☆18May 19, 2022Updated 3 years ago
- ☆10Dec 17, 2025Updated 3 months ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆11May 31, 2024Updated last year
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Oct 30, 2024Updated last year
- Documentation of matestack-ui-core built with matestack itself, consuming Github API for content☆11Mar 11, 2021Updated 5 years ago
- Copy Number Variations (CNV) Simulator☆11Jul 30, 2018Updated 7 years ago
- Library to visualize protein sequence features in Typescript using D3. This repository is based on calipho-sib/feature-viewer.☆24Feb 4, 2023Updated 3 years ago
- ☆15Dec 8, 2023Updated 2 years ago
- CWL implementation of CloudNeo: A cloud pipeline for identifying patient-specific tumor neoantigens☆19Apr 19, 2019Updated 6 years ago
- CWL for GDC DNASeq workflows☆23Updated this week
- ☆14Mar 26, 2024Updated last year
- Web application for protein-ligand binding sites analysis and visualization☆16Jan 9, 2023Updated 3 years ago
- Antibody-Specific Epitope Mapping☆17Sep 10, 2025Updated 6 months ago
- Genotyping Immunoglobulin Heavy Chain Variable Genes using Short Read Data☆12May 9, 2025Updated 10 months ago
- m(6)A methylation analysis☆10Mar 9, 2019Updated 7 years ago
- Flexible Artificial Intelligence Docking☆18Aug 27, 2025Updated 6 months ago
- ☆14Mar 6, 2026Updated 2 weeks ago
- GWAS genetics Fine-mapping method☆17May 17, 2024Updated last year
- ☆17May 5, 2020Updated 5 years ago
- a gatk4 pipeline with NA12878 demo dateset ,conda environment used(no GPU)☆15Aug 28, 2019Updated 6 years ago
- Dockerfiles for FreeSurfer☆12Nov 13, 2025Updated 4 months ago
- Predict epigenetic age from DNA methylation data☆71Nov 26, 2025Updated 3 months ago
- ☆10Mar 7, 2023Updated 3 years ago