AdrianListon / Cross-Entropy-testLinks
Simplified script for applying the t-SNE diff method on high parameter flow cytometry data
☆11Updated last year
Alternatives and similar repositories for Cross-Entropy-test
Users that are interested in Cross-Entropy-test are comparing it to the libraries listed below
Sorting:
- Single-cell analysis with non-negative matrix factorization☆45Updated 2 weeks ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated 3 weeks ago
- R implementation of the Reshef and Rumker CNA method (https://github.com/immunogenomics/cna)☆15Updated last year
- Wrapper and helper functions to use bulk RNA-seq differential expression methods with single-cell data☆19Updated last year
- Flexible, probablistic metrics for quality control of scRNA-seq data☆20Updated 2 years ago
- Cell type pipes for R☆51Updated last year
- Extension of SpatialExperiment with sf☆55Updated last month
- R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)☆36Updated 7 months ago
- Calculation of distance metrics for matrices☆25Updated 6 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- Antique or modern atlas-like depictions of non-linear dimensionality reduction for single cell data☆18Updated last month
- Toolkit for Single-Cell Velocity☆58Updated last month
- This R package for performing module repertoire analyses and generating fingerprint representations☆16Updated 3 years ago
- An analytics package for single cell data☆22Updated 3 years ago
- ☆25Updated 3 years ago
- R package for benchmarking single cell analysis methods☆32Updated last year
- Collection of useful methods for single cell analysis☆14Updated 11 months ago
- Shiny app for the analysis of single cell data☆26Updated 4 months ago
- ☆10Updated 3 years ago
- Compute the neighborhood consolidation matrix and identify SHRs☆13Updated last month
- An r package that works as a wrapper to homologene☆46Updated last year
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Updated last year
- A database of useful gene signatures for single-cell analysis☆25Updated 2 months ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- ☆66Updated 2 months ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- distinct: a method for differential analyses via hierarchical permutation tests☆11Updated last year
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated last month
- ☆21Updated 3 years ago