cozygene / refactorLinks
☆25Updated 6 years ago
Alternatives and similar repositories for refactor
Users that are interested in refactor are comparing it to the libraries listed below
Sorting:
- Various Ideas for Confounder Adjustment in Regression☆24Updated 2 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 9 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Updated 6 years ago
- Sample code for ldsc analyses in UKBB☆31Updated 2 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 5 years ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆43Updated 7 months ago
- A suite for the analysis of CLIP-Seq datasets.☆12Updated 3 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- countsimQC - Compare characteristic features of count data sets☆27Updated 2 weeks ago
- Learn and validate subtypes from multiple traits☆20Updated 4 years ago
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 7 months ago
- An R package for multivariate adaptive shrinkage.☆92Updated 8 months ago
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆48Updated 6 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated 2 years ago
- A Julia package for extracting mutation signatures using topic models☆19Updated 3 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆38Updated last year
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Glimma R package☆50Updated 10 months ago
- R package for plotting 3D graphical visualization of multi-omics data.☆22Updated 3 years ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 2 years ago
- Independent Hypothesis Weighting☆15Updated last year
- Clone of the Bioconductor repository for the basilisk package.☆28Updated last month
- Code for performing PCA followed by CCA☆18Updated 6 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆31Updated 4 years ago
- RSS: Regression with Summary Statistics☆50Updated 10 months ago
- Single sample network reconstruction in R☆22Updated 5 years ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆23Updated 5 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago