ZhouQiangwei / MethHaploLinks
allele specific DNA methylation haplotype region
☆13Updated 2 years ago
Alternatives and similar repositories for MethHaplo
Users that are interested in MethHaplo are comparing it to the libraries listed below
Sorting:
- ☆38Updated 4 years ago
- QDNAseq.hg38: QDNAseq bin annotation for hg38☆16Updated last month
- BISulfite-seq CUI Toolkit☆24Updated 2 months ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆28Updated 6 years ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- ☆26Updated last year
- TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.☆48Updated 3 years ago
- Tools for analyzing DNA methylation data☆44Updated 2 weeks ago
- A pipeline for analyzing DNA methylation data from bisulfite sequencing.☆71Updated 3 years ago
- Tools for processing and analyzing structural variants.☆33Updated 10 years ago
- RNA-seq workflow: differential transcript usage☆23Updated 2 years ago
- QDNAseq package for Bioconductor☆53Updated last year
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32Updated 4 years ago
- A software for calculating telomere length☆72Updated 7 years ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆64Updated last year
- DCC/DAC methylation pipeline source☆57Updated 5 years ago
- Genomic Association Tester☆34Updated 2 years ago
- ☆49Updated 2 years ago
- ☆18Updated 6 years ago
- R package for DNA methylation analysis☆19Updated last year
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- ENCODE long read RNA-seq pipeline☆51Updated 2 years ago
- Python program designed to reconstruct immunoglobulin gene rearrangements and oncogenic translocations from WGS, WES and capture NGS in l…☆20Updated 2 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- Enhanced version of the FastQTL QTL mapper☆70Updated 2 years ago
- Create mutation signatures from MAF's, and decompose them into Stratton signatures☆60Updated 6 years ago
- ☆34Updated last week
- ☆16Updated 2 years ago
- Tools for extracting read counts and gc and mappability statistics in preparation for running HMMCopy.☆41Updated 4 years ago
- TreeExp 2.0: Toolbox for analyzing expression evolution based on RNA-seq count data☆15Updated 6 years ago