ZhouQiangwei / MethHaploLinks
allele specific DNA methylation haplotype region
☆13Updated 2 years ago
Alternatives and similar repositories for MethHaplo
Users that are interested in MethHaplo are comparing it to the libraries listed below
Sorting:
- ☆38Updated 4 years ago
- QDNAseq.hg38: QDNAseq bin annotation for hg38☆16Updated last week
- QDNAseq package for Bioconductor☆52Updated last year
- TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.☆48Updated 2 years ago
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32Updated 3 years ago
- SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3☆38Updated 5 years ago
- Tools for extracting read counts and gc and mappability statistics in preparation for running HMMCopy.☆41Updated 4 years ago
- Tools for processing and analyzing structural variants.☆33Updated 10 years ago
- BISulfite-seq CUI Toolkit☆25Updated last month
- ☆26Updated last year
- RNA-seq workflow: differential transcript usage☆23Updated 2 years ago
- Create mutation signatures from MAF's, and decompose them into Stratton signatures☆60Updated 6 years ago
- A pipeline for analyzing DNA methylation data from bisulfite sequencing.☆70Updated 3 years ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆27Updated 6 years ago
- Single-cell Bisulfite Sequencing Data Mapping☆12Updated 4 years ago
- ☆46Updated 2 years ago
- Genomic Association Tester☆32Updated 2 years ago
- Tools for analyzing DNA methylation data☆44Updated this week
- A software for calculating telomere length☆72Updated 7 years ago
- DCC/DAC methylation pipeline source☆57Updated 5 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆41Updated 3 years ago
- ☆21Updated 3 weeks ago
- ☆37Updated 6 years ago
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆43Updated 4 years ago
- ENCODE whole-genome bisulfite sequencing (WGBS) pipeline☆32Updated 3 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 7 years ago
- code associated with crane-nature-2015, 10.1038/nature14450☆36Updated 10 years ago
- ⛏ HLA predictions from NGS shotgun data☆55Updated 4 months ago
- 4C-seq processing pipeline☆26Updated 7 months ago
- R package for inferring copy number from read depth☆32Updated 3 years ago