combining p-values using modified stouffer-liptak for spatially correlated results (probes)
☆50Mar 18, 2022Updated 4 years ago
Alternatives and similar repositories for combined-pvalues
Users that are interested in combined-pvalues are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A utility to map bisulfite sequencing data to the Illumina 450K methylation CpG set☆18Feb 12, 2016Updated 10 years ago
- ☆22Dec 17, 2020Updated 5 years ago
- Relevant papers for CNV and SV approaches☆95Nov 5, 2024Updated last year
- Python package to analyze DNA methylation data☆46Aug 23, 2026Updated last month
- Collection of scripts for working with Wiggle files and analyzing sequencing data☆17Feb 9, 2019Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"☆14Apr 1, 2020Updated 6 years ago
- A 450k tutorial in the form of an R package☆12Jul 5, 2016Updated 10 years ago
- Devel repository for bsseq☆38Aug 20, 2026Updated last month
- fast and accurate alignment of BS-Seq reads using bwa-mem and a 3-letter genome☆161Sep 9, 2026Updated 2 weeks ago
- ChIP-seq peak calling with GC effects adjustment☆10Jul 5, 2018Updated 8 years ago
- TFFM framework☆13Sep 22, 2025Updated last year
- A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)☆27Aug 3, 2026Updated last month
- BISulfite-seq CUI Toolkit☆70Jul 18, 2026Updated 2 months ago
- Regional association plots☆27Apr 1, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- bumphunter☆18Mar 19, 2024Updated 2 years ago
- ☆14Aug 30, 2025Updated last year
- A toolbox for sparse contrastive principal component analysis☆12Feb 10, 2025Updated last year
- Assemble the Genome in a Bottle sequencing data☆10Aug 4, 2017Updated 9 years ago
- Genetic Association Analysis Under Complex Survey Sampling☆13Nov 13, 2019Updated 6 years ago
- ☆14May 12, 2023Updated 3 years ago
- Effector and Perturbation Estimation Engine (EPEE) conducts differential analysis of transcription factor activity from gene expression d…☆16Oct 3, 2019Updated 6 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆37Oct 2, 2014Updated 11 years ago
- Python-based Illumina methylation array analysis software☆16Jan 25, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Python library to parse file formats related to Illumina bead arrays☆50Jan 30, 2025Updated last year
- BigWig manpulation tools using libBigWig and htslib☆30Aug 8, 2024Updated 2 years ago
- ☆13Jun 24, 2019Updated 7 years ago
- Main site for DSSG Training 2015☆10Jul 29, 2015Updated 11 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆40Aug 7, 2026Updated last month
- TopoWx ("Topography Weather") is an open source framework written in Python and R for interpolating temperature observations at a topocli…☆22Jul 10, 2017Updated 9 years ago
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆57Mar 12, 2026Updated 6 months ago
- Check strandedness of RNA-Seq fastq files☆134Aug 30, 2022Updated 4 years ago
- A simple and performant API for working with many genomic file formats in a consistent fashion☆16Mar 23, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- conda recipes for genomic data☆84Jul 31, 2021Updated 5 years ago
- Differential methylation: Easy, Fast, Identification and ANnoTation☆19Dec 18, 2020Updated 5 years ago
- Tools for analyzing DNA methylation data☆48May 18, 2026Updated 4 months ago
- Estimate genetic correlation using predicted expression☆28Mar 8, 2018Updated 8 years ago
- Community Material Deprivation Index☆18Sep 9, 2025Updated last year
- snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.☆20Jan 19, 2024Updated 2 years ago
- Continuous Wavelet Transform. Based on the work of Roger Fearick.☆13Feb 22, 2016Updated 10 years ago