brentp / combined-pvaluesLinks
combining p-values using modified stouffer-liptak for spatially correlated results (probes)
☆46Updated 3 years ago
Alternatives and similar repositories for combined-pvalues
Users that are interested in combined-pvalues are comparing it to the libraries listed below
Sorting:
- Create mutation signatures from MAF's, and decompose them into Stratton signatures☆60Updated 6 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆53Updated 3 weeks ago
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆42Updated 3 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- create, manage, and upload track hubs for use in the UCSC genome browser☆54Updated last year
- Genomic Association Tester☆31Updated 2 years ago
- Enhanced version of the FastQTL QTL mapper☆66Updated 2 years ago
- Robust Allele Specific Quantification and quality controL☆39Updated 3 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆70Updated 5 months ago
- Functional genomics and genome-wide association studies☆67Updated 6 years ago
- ☆25Updated 3 weeks ago
- R package wrapping bedtools☆41Updated 3 months ago
- gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (…☆33Updated 3 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆71Updated last year
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- Get SNP proxies from the 1000 Genomes Project.☆28Updated 6 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆87Updated 3 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- a peak-calling and differential analysis tool for replicated ChIP-Seq data☆37Updated 3 years ago
- Tutorials covering various topics in genomic data analysis.☆17Updated 6 years ago
- Rocking R at UMCCR☆9Updated 4 years ago
- Parse TF motifs from public databases, read into R, and scan using 'rtfbs'.☆23Updated 6 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆34Updated 7 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- RNA-seq workflow: differential transcript usage☆21Updated last year
- Lightweight Iterative Gene set Enrichment in R☆57Updated 8 months ago
- GTEx analysis scripts☆20Updated 8 years ago
- DCC/DAC methylation pipeline source☆55Updated 4 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆49Updated this week