A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays
☆30Dec 5, 2023Updated 2 years ago
Alternatives and similar repositories for illumina450k_filtering
Users that are interested in illumina450k_filtering are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Devel repository for minfi☆64Apr 30, 2024Updated 2 years ago
- ☆22Dec 17, 2020Updated 5 years ago
- bumphunter☆18Mar 19, 2024Updated 2 years ago
- A cross-package Bioconductor workflow for analysing methylation array data☆11Mar 31, 2017Updated 9 years ago
- An open-source, cloud-ready web application for simplified deployment of big data workflows.☆36May 28, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- MapOptics is a lightweight cross-platform tool that enables the user to visualise and interact with the alignment of Bionano optical mapp…☆18Feb 18, 2022Updated 4 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆37Oct 2, 2014Updated 11 years ago
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆18Jan 28, 2024Updated 2 years ago
- SRA python tools☆11Jun 9, 2021Updated 5 years ago
- A 450k tutorial in the form of an R package☆12Jul 5, 2016Updated 10 years ago
- Efficient algorithms for analyzing DNA methylation data.☆60Jan 22, 2026Updated 7 months ago
- ☆12Dec 8, 2021Updated 4 years ago
- A normalization and copy number variation calling procedure for whole exome DNA sequencing data.☆11Sep 29, 2019Updated 6 years ago
- ☆11Aug 12, 2022Updated 4 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Functional enrichment analysis of high-throughput omics data☆20Jan 6, 2025Updated last year
- SV clustering☆32Jul 5, 2021Updated 5 years ago
- ☆29Oct 17, 2023Updated 2 years ago
- Curated list of TCGA resources☆61Nov 10, 2017Updated 8 years ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- Send R code/R scripts/shell commands to LSF cluster without leaving R☆27Mar 14, 2025Updated last year
- ☆56Jan 4, 2023Updated 3 years ago
- Epigenetic Smoking status Estimator☆10Nov 24, 2020Updated 5 years ago
- R package containing useful functions for mutational signature analysis☆88Updated this week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ERVcaller is a tool designed to accurately detect and genotype non-reference unfixed endogenous retroviruses (ERVs) and other transposabl…☆13Jan 10, 2024Updated 2 years ago
- Write CWL in R☆15May 9, 2024Updated 2 years ago
- Accompanying analysis code for the FRASER manuscript☆25Aug 27, 2020Updated 6 years ago
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10May 17, 2017Updated 9 years ago
- Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets☆107Aug 2, 2023Updated 3 years ago
- ☆29Sep 23, 2025Updated 11 months ago
- A served-oriented repository of Shiny apps and Rmd documents☆11Feb 18, 2026Updated 6 months ago
- ☆24May 15, 2019Updated 7 years ago
- ☆14Jan 28, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An introduction about the Genome-in-a-Bottle project☆26Aug 30, 2019Updated 7 years ago
- ☆33Nov 6, 2022Updated 3 years ago
- A pipeline for Human GWAS analysis that accomodates both Affymetrix (raw .CEL files) and Illumina (Plink binaries) data☆13May 14, 2018Updated 8 years ago
- Find and characterise transposable element insertions☆21May 26, 2023Updated 3 years ago
- Method to detect exonic CNVs in NGS Gene Targeted Panels☆16Dec 3, 2019Updated 6 years ago
- Scripts for GWAS association and metaanalysis☆43Dec 8, 2020Updated 5 years ago
- several R scripts about Machine Learning that I code☆11Jun 3, 2021Updated 5 years ago