FoxoTech / methylprepLinks
Python-based preprocessing software for Illumina methylation arrays
☆36Updated last year
Alternatives and similar repositories for methylprep
Users that are interested in methylprep are comparing it to the libraries listed below
Sorting:
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆23Updated 4 months ago
- ☆39Updated 8 months ago
- Python-based Illumina methylation array analysis software☆17Updated last year
- Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"☆45Updated last year
- Universal RObust Peak Annotator☆16Updated last year
- Clustering TF motif models from multiple species (mostly focused on Drosophila and human) by similarity to remove redundancy☆26Updated 2 years ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21Updated 2 years ago
- Annotation and segmentation of MAS-seq data☆20Updated 2 years ago
- Python toolbox for multi-omics data mapping and analysis☆24Updated 2 years ago
- Cellsnake tool main repo☆34Updated last year
- Builds a PEP from SRA or GEO accessions☆49Updated 8 months ago
- Python package to analyze DNA methylation data☆42Updated 6 months ago
- A Python package for gene network analysis☆32Updated 2 years ago
- ☆23Updated 4 months ago
- FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program☆19Updated 3 years ago
- The script presents a simple way to visualize features on human chromosome ideograms☆42Updated last month
- Repository for the Anczukow-Lab splicing pipeline☆15Updated 2 months ago
- ☆21Updated 2 months ago
- An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.☆4Updated last year
- A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.☆45Updated last year
- Feature-rich Python implementation of the tximport package for gene count estimation.☆36Updated last week
- A tool for fast and accurate summarizing of variant calling format (VCF) files☆60Updated 2 years ago
- A python package for showing JBrowse views☆25Updated last year
- Inferring gene co-expression networks from single cell gene expression data☆24Updated 2 years ago
- Code associated with 2019 manuscript entitled "Transcript expression-aware annotation improves rare variant discovery and interpretation…☆33Updated 3 years ago
- Tools for making plots of genomic datasets in a genome-browser-like format☆32Updated 6 months ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- Python module to read binary Plink files.☆17Updated 11 months ago
- PTa Analysis TOolkit☆13Updated last year
- Quick lookup documents for commonly used tools☆9Updated 7 months ago