FoxoTech / methylprepLinks
Python-based preprocessing software for Illumina methylation arrays
☆42Updated 2 years ago
Alternatives and similar repositories for methylprep
Users that are interested in methylprep are comparing it to the libraries listed below
Sorting:
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- ☆39Updated 6 months ago
- Universal RObust Peak Annotator☆16Updated 2 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Updated 6 years ago
- A tool for fast and accurate summarizing of variant calling format (VCF) files☆61Updated 3 years ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆24Updated last year
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- GWAS gold standards repository☆40Updated 2 years ago
- Explore and download data from the recount3 project☆37Updated 4 months ago
- Feature-rich Python implementation of the tximport package for gene count estimation.☆42Updated 3 months ago
- ☆23Updated last year
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆46Updated 10 months ago
- Builds a PEP from SRA or GEO accessions☆54Updated last week
- A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data☆35Updated last year
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21Updated 2 years ago
- WES HLA Typing based on multiple alternative tools☆18Updated 4 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- Accompanying analysis code for the FRASER manuscript☆25Updated 5 years ago
- Extracting disease-specific genomic coordinates from GWAS catalog☆21Updated 6 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- ☆38Updated 7 years ago
- RAGE-seq scripts☆18Updated 4 years ago
- Comprehensive Human Expressed SequenceS☆19Updated 6 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆41Updated 3 years ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Updated 4 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- ☆24Updated 2 weeks ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆66Updated 4 years ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 4 years ago
- A chronological age predictor based on DNA methylation☆22Updated last year