FoxoTech / methylprepLinks
Python-based preprocessing software for Illumina methylation arrays
☆42Updated 2 years ago
Alternatives and similar repositories for methylprep
Users that are interested in methylprep are comparing it to the libraries listed below
Sorting:
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆24Updated last year
- A tool for fast and accurate summarizing of variant calling format (VCF) files☆61Updated 3 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- GWAS gold standards repository☆39Updated 2 years ago
- ☆40Updated 6 months ago
- ☆23Updated this week
- Universal RObust Peak Annotator☆16Updated 2 years ago
- Annotation and segmentation of MAS-seq data☆20Updated 2 years ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21Updated 2 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Updated 6 years ago
- Explore and download data from the recount3 project☆37Updated 3 months ago
- Code to reproduce analyses from the sleuth paper☆16Updated 7 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆41Updated 3 years ago
- Repository for the Anczukow-Lab splicing pipeline☆16Updated 9 months ago
- ☆38Updated 7 years ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- Fuji plot—a circos representation of multiple GWAS results—☆92Updated 7 months ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- Statistical power studies for multi-omics experiments.☆32Updated 11 months ago
- Differential ATAC-seq toolkit☆27Updated 2 years ago
- A portable, flexible, parallelized tool for complete processing of massively parallel reporter assay data☆35Updated last year
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- Builds a PEP from SRA or GEO accessions☆54Updated last month
- Identifying recurrent mutations in cancer☆39Updated 4 years ago
- Modelling DNA methylation profiles☆24Updated 5 years ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆76Updated 3 months ago
- cfDNA cell type of origin estimation☆34Updated 2 years ago
- ☆23Updated 11 months ago