CshlSiepelLab / LINSIGHTLinks
☆27Updated 4 months ago
Alternatives and similar repositories for LINSIGHT
Users that are interested in LINSIGHT are comparing it to the libraries listed below
Sorting:
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆54Updated this week
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆43Updated 4 years ago
- ☆40Updated 7 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- Exon-exon splice junctions across SRA☆42Updated 4 years ago
- IDR☆30Updated 2 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- (DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER☆31Updated 6 years ago
- ☆78Updated 11 years ago
- R package for inferring copy number from read depth☆32Updated 3 years ago
- Create mutation signatures from MAF's, and decompose them into Stratton signatures☆60Updated 6 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- Tip and tricks for BAM files☆86Updated 7 years ago
- Run Picard on BAM files and collate 90 metrics into one file.☆40Updated 8 years ago
- Enhanced version of the FastQTL QTL mapper☆70Updated 2 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- BigWig and BAM utilities☆98Updated last year
- gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (…☆33Updated 3 years ago
- A software for calculating telomere length☆72Updated 7 years ago
- Documenting usage and experience with bioinformatic tools☆40Updated 10 years ago
- RepEnrich is a method to estimate repetitive element enrichment using high-throughput sequencing data.☆28Updated 3 years ago
- ☆50Updated 4 years ago
- Genomic Association Tester☆32Updated 2 years ago
- Battenberg algorithm and associated implementation script☆53Updated 5 years ago
- A complete tool set for molecular QTL discovery and analysis☆58Updated last year
- RNA-seq workflow: differential transcript usage☆23Updated 2 years ago
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- a peak-calling and differential analysis tool for replicated ChIP-Seq data☆36Updated 3 years ago
- Gene Fusion Visualiser☆51Updated 2 years ago
- Ultraperformant reimplementation of SICER☆58Updated 4 years ago