A Practical (And Opinionated) Guide To Analyzing 450K Data
☆35Oct 2, 2014Updated 11 years ago
Alternatives and similar repositories for 450k-analysis-guide
Users that are interested in 450k-analysis-guide are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A 450k tutorial in the form of an R package☆12Jul 5, 2016Updated 9 years ago
- Devel repository for minfi☆64Apr 30, 2024Updated 2 years ago
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Nov 26, 2025Updated 5 months ago
- Pipeline for generating RNAseq-based cancer patient reports☆12Apr 15, 2026Updated 3 weeks ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- CAVA (Clinical Annotation of VAriants)☆14Sep 28, 2018Updated 7 years ago
- A CNN model to identify MEIs in WGS☆13Mar 4, 2025Updated last year
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- Pipeline for structural variant image curation and analysis.☆49Dec 5, 2021Updated 4 years ago
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- R htmlwidget package for ideogram.js☆15Oct 26, 2022Updated 3 years ago
- HGNC Comparison of Orthology Predictions (HCOP)☆15Mar 22, 2018Updated 8 years ago
- A tool for diagnosing SMA in exome, genome or targeted sequencing data☆13Apr 30, 2025Updated last year
- Introduction to Computational Biology☆33Apr 13, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆13Oct 7, 2025Updated 6 months ago
- ☆13Dec 19, 2018Updated 7 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- sort genomic data☆36Nov 7, 2025Updated 5 months ago
- A Shiny App for visualizing genomic data☆19Apr 24, 2022Updated 4 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Sep 27, 2016Updated 9 years ago
- dbVar☆41Apr 10, 2026Updated 3 weeks ago
- Efficient algorithms for analyzing DNA methylation data.☆57Jan 22, 2026Updated 3 months ago
- STRspy: a novel alignment and quantification-based state-of-the-art method, short tandem repeat (STR) detection calling tool designed spe…☆18Apr 6, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- BigWig manpulation tools using libBigWig and htslib☆30Aug 8, 2024Updated last year
- DeepMP is a computational tool to detect DNA modifications in Nanopore sequencing data☆27Mar 18, 2022Updated 4 years ago
- Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.☆14Nov 11, 2019Updated 6 years ago
- Structural Variation breakpoint discovery via adaptive learning☆17Jul 6, 2023Updated 2 years ago
- Web-site for the 2020 CRUK CC Bioinformatics Summer School (Held virtually)☆24Mar 4, 2021Updated 5 years ago
- ☆55Jun 24, 2020Updated 5 years ago
- Tandem repeat genotyping from long reads☆21Apr 5, 2026Updated last month
- Unfazed by genomic variant phasing☆27May 26, 2024Updated last year
- SEEKIN: SEquence-based Estimation of KINship☆14Oct 11, 2017Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)☆27Jul 28, 2025Updated 9 months ago
- Plot CNV data with a genome viewer in R☆15Apr 5, 2017Updated 9 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆29Dec 5, 2023Updated 2 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- amplicon/smMIP mapping and analysis pipeline☆11Dec 8, 2022Updated 3 years ago
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Sep 24, 2018Updated 7 years ago
- Analysis of RNAseq data from (host-associated) microbial mixtures☆12Nov 25, 2019Updated 6 years ago