LD Score Regression (LDSC)
☆16Dec 16, 2024Updated last year
Alternatives and similar repositories for ldsc
Users that are interested in ldsc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An ensemble of functions for use analysing the UKBB records on DNA Nexus☆15Apr 22, 2026Updated 2 months ago
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- Binaries for tools used in genetics in an R package☆12Apr 7, 2025Updated last year
- ☆15Dec 8, 2023Updated 2 years ago
- ☆10Jul 24, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- GENI plots to visualise results from genome-wide association studies☆32Oct 14, 2024Updated last year
- R package to streamline use of the AllofUs researcher workbench☆19Jun 17, 2026Updated 2 weeks ago
- Simulate GWAS data from an arbitrary DAG☆12May 18, 2026Updated last month
- ☆13Jul 4, 2023Updated 3 years ago
- Code snippets for use in All of Us Workbench notebooks.☆20May 17, 2023Updated 3 years ago
- An R package for phenotype generation and association testing for phenome wide associations studies (PheWAS)☆14Jul 11, 2024Updated last year
- An R package for creating ggplot2 based miami plots.☆19Mar 7, 2025Updated last year
- LDlinkR☆64Jun 22, 2026Updated last week
- MR-link-2: pleiotropy robust cis MR☆23Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Connecting GWAS summary data to analytical tools☆24Mar 25, 2024Updated 2 years ago
- Notes and code for running UK Biobank GWAS at the MRC IEU☆19Jul 18, 2024Updated last year
- ☆12Oct 23, 2023Updated 2 years ago
- ScoMAP is an R package to spatially integrate single-cell omics data into virtual cells and infer enhancer-to-gene relationships.☆30Oct 4, 2021Updated 4 years ago
- jcat (jupyter cat) is a command line tool for viewing notebook(*.ipynb) files in terminal.☆10Sep 17, 2022Updated 3 years ago
- Fast API server for calculating linkage disequilibrium☆20Apr 24, 2025Updated last year
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆19Jun 29, 2022Updated 4 years ago
- Home Repository for the CfRR website☆15Jun 4, 2026Updated last month
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆18Feb 9, 2023Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆22Jan 10, 2025Updated last year
- PredictDB Pipeline for GTEx v7 data☆18Nov 9, 2022Updated 3 years ago
- Package for genetic network analysis of GWAS summary statistics☆18Aug 24, 2025Updated 10 months ago
- Manhattan++☆29Feb 13, 2024Updated 2 years ago
- Hierarchical Graph Clustering using Node Pair Sampling (MLG, KDD Workshop) - Multi-scale Clustering in Graphs using Modularity (DiVA)☆17Oct 9, 2020Updated 5 years ago
- Steve's Miscellaneous Functions☆10May 26, 2026Updated last month
- Specification for the GWAS-VCF format (manuscript in preparation)☆26Aug 3, 2021Updated 4 years ago
- CELLEX (CELL-type EXpression-specificity)☆44Apr 29, 2026Updated 2 months ago
- GWAS Summary Statistics for Brain Imaging Phenotypes☆21Sep 6, 2021Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆35Jun 25, 2026Updated last week
- S-LDSC scripts for use on MR server.☆10Sep 23, 2021Updated 4 years ago
- Regional association plots☆27Apr 1, 2024Updated 2 years ago
- iterative clustering pipeline of big single cell datasets.☆39Sep 5, 2025Updated 9 months ago
- lhcMR☆26Mar 24, 2024Updated 2 years ago
- ☆22Jul 25, 2023Updated 2 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆29Sep 20, 2022Updated 3 years ago