LD Score Regression (LDSC)
☆16Dec 16, 2024Updated last year
Alternatives and similar repositories for ldsc
Users that are interested in ldsc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Aid researchers who work on the UKB RAP.☆10Sep 28, 2026Updated last month
- GENI plots to visualise results from genome-wide association studies☆34Oct 14, 2024Updated 2 years ago
- We provided a step-by-step guide for performing colocalization analysis using the coloc package in R.☆11Nov 17, 2023Updated 2 years ago
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- Multi-ancestry Conditional and Joint Analysis of GWAS summary statistics☆20Oct 20, 2026Updated last week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- An ensemble of functions for use analysing the UKBB records on DNA Nexus☆15Apr 22, 2026Updated 6 months ago
- ☆10Jul 24, 2020Updated 6 years ago
- R package for Genetic Factor Analysis (GFA)☆11Oct 16, 2026Updated 2 weeks ago
- Binaries for tools used in genetics in an R package☆13Apr 7, 2025Updated last year
- SparsePainter: fast, accurate and fine-scale chromosome painting software based on PBWT and HashMap☆21Sep 25, 2026Updated last month
- Simulate GWAS data from an arbitrary DAG☆14Sep 15, 2026Updated last month
- MultiSuSiE is a multi-ancestry extension of the Sum of Single Effects model☆23Sep 28, 2026Updated last month
- ☆13Jul 4, 2023Updated 3 years ago
- R package to streamline use of the AllofUs researcher workbench☆19Sep 3, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Adding random effects model to the METAL software☆15Jun 11, 2023Updated 3 years ago
- Code snippets for use in All of Us Workbench notebooks.☆19May 17, 2023Updated 3 years ago
- ☆15Dec 8, 2023Updated 2 years ago
- This is a pip package for data manipulation, cleaning in the TRE.☆10Sep 6, 2024Updated 2 years ago
- The UKB Git Audit Tool is a utility designed to audit Git repositories for potential public exposure of UK Biobank data. It performs a co…☆19Apr 30, 2026Updated 6 months ago
- An analytical approach for GWAS-by-Subtraction☆16May 27, 2025Updated last year
- This is an R package to retrieve data from Open Target☆15Jul 30, 2026Updated 3 months ago
- An R package for phenotype generation and association testing for phenome wide associations studies (PheWAS)☆14Jul 11, 2024Updated 2 years ago
- Package for genetic network analysis of GWAS summary statistics☆18Aug 24, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Discovery of genetic variants with shared effect across multiple phenotypes from GWAS summary statistics☆16Oct 27, 2023Updated 3 years ago
- ☆12Oct 23, 2023Updated 3 years ago
- BWMR (Bayesian Weighted Mendelian Randomization)☆22Jun 14, 2023Updated 3 years ago
- AD regulome analysis☆16Apr 4, 2023Updated 3 years ago
- LDlinkR☆66Jun 22, 2026Updated 4 months ago
- Notes and code for running UK Biobank GWAS at the MRC IEU☆19Jul 18, 2024Updated 2 years ago
- jcat (jupyter cat) is a command line tool for viewing notebook(*.ipynb) files in terminal.☆10Sep 17, 2022Updated 4 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆19Jun 29, 2022Updated 4 years ago
- Clean and identify errors in GWAS summary statistics☆21Jul 21, 2026Updated 3 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- An R package for creating ggplot2 based miami plots.☆20Mar 7, 2025Updated last year
- Fast API server for calculating linkage disequilibrium☆20Apr 24, 2025Updated last year
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆19Feb 9, 2023Updated 3 years ago
- ScoMAP is an R package to spatially integrate single-cell omics data into virtual cells and infer enhancer-to-gene relationships.☆30Oct 4, 2021Updated 5 years ago
- Connecting GWAS summary data to analytical tools☆24Mar 25, 2024Updated 2 years ago
- non-linear MR for semi-summarized data☆22May 26, 2026Updated 5 months ago
- mouse_fullStack_annotations☆16Jun 29, 2023Updated 3 years ago