CMPG / signetLinks
An R package to detect selection in biological pathways
☆14Updated 2 years ago
Alternatives and similar repositories for signet
Users that are interested in signet are comparing it to the libraries listed below
Sorting:
- machine learning applications for dadi☆16Updated 11 months ago
- Automated and Distributed Population Genetic Model Inference from Allele Frequency Spectra☆18Updated last month
- Haplotype and population structure inference using neural networks.☆27Updated last year
- Utilities for analyzing next generation sequencing data.☆15Updated 4 years ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆18Updated 8 years ago
- Work for the tree sequence inference paper.☆23Updated 5 years ago
- Reference genome quality scores☆21Updated 5 years ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆33Updated 3 years ago
- Computational Analysis of Gene Expression Evolution☆45Updated 5 months ago
- Sweep Inference Framework (controlling for correlation)☆28Updated last year
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆13Updated 11 months ago
- Make Pseudo-Reference Genome from VCF/BCF☆14Updated 5 years ago
- convert a blast output to a bed file☆12Updated 10 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆39Updated 4 months ago
- ☆13Updated 4 years ago
- Reference-free quality assessment for Hi-C sequencing data☆13Updated last year
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆22Updated 2 months ago
- ☆29Updated 3 years ago
- Toolkit for Population Genetic Statistics from Pool-Sequenced Samples, e.g., in Evolve and Resequence experiments☆48Updated 3 months ago
- Taxon-aware analysis of clustered protein sequences☆31Updated last year
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 5 months ago
- Implementation of a polymorphism aware phylogenetic model using HYPHY☆19Updated 4 years ago
- An Efficient Swiss Army Knife for Population Genomic Analyses in R☆38Updated last year
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆29Updated 6 years ago
- ☆26Updated 11 months ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Updated 2 years ago
- Sampling and manipulating genome-wide ancestral recombination graphs (ARGs)☆14Updated 2 years ago
- Tools for dealing with tree sequences coming to and from SLiM.☆28Updated last month
- Improved Phased Assembler☆28Updated 3 years ago
- a broadly applicable tool for automated gene identification and retrieval☆32Updated last year