Jianhua-Wang / easyfinemapLinks
user-friendly pipeline for GWAS fine-mapping
☆12Updated 9 months ago
Alternatives and similar repositories for easyfinemap
Users that are interested in easyfinemap are comparing it to the libraries listed below
Sorting:
- This is a pipeline for calculating weights for TWAS☆32Updated 3 years ago
- Create Regional Association Plots☆12Updated 3 months ago
- ☆12Updated 2 years ago
- R script to make Manhattan-style plot for TWAS☆41Updated 4 years ago
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆37Updated 10 months ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated last year
- ☆23Updated 4 months ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 5 months ago
- SCALLOP-INF analysis☆20Updated last month
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated 2 years ago
- An R package for creating ggplot2 based miami plots.☆18Updated 9 months ago
- GENI plots to visualise results from genome-wide association studies☆30Updated last year
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated 2 years ago
- ☆21Updated 4 months ago
- Cross-population fine-mapping☆40Updated last year
- Assessing enrichment of complex disease or trait associations among QTLs☆15Updated 5 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆36Updated 2 months ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Updated 4 years ago
- Regional association plots☆24Updated last year
- Integration of TWAS and Colocalization Analysis☆17Updated last year
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆20Updated 3 months ago
- Tissue-Gene Fine-Mapping☆26Updated 8 months ago
- Manhattan++☆28Updated last year
- Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies☆11Updated 3 years ago
- ☆20Updated 2 months ago
- S-LDSC scripts for use on MR server.☆10Updated 4 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆55Updated this week
- ☆15Updated 4 years ago
- 🌓 Allele specific analyses across cell states and conditions☆10Updated 3 years ago
- A powerful TWAS framework leveraging summary-level reference data☆31Updated 8 months ago