joepickrell / gwas-pwLinks
Pariwise analysis of GWAS
☆46Updated 7 years ago
Alternatives and similar repositories for gwas-pw
Users that are interested in gwas-pw are comparing it to the libraries listed below
Sorting:
- ☆37Updated 4 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 3 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆35Updated 6 months ago
- Colocalization analysis of genetic association signals☆53Updated 6 months ago
- Regional association plots☆24Updated last year
- Genotype-based Prediction (GenoPred)☆76Updated 2 weeks ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆48Updated 2 years ago
- Software for estimating correlation of trait effect sizes across populations☆53Updated 6 months ago
- Genetics ToolboX R package☆32Updated 5 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- ☆35Updated 2 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆62Updated 2 months ago
- GWAS Summary Statistics Data Harmonisation☆25Updated 2 months ago
- GWAS for survival analysis in large cohorts☆22Updated last year
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Updated last year
- Fine-tuning polygenic risk score models using GWAS summary statistics☆54Updated 2 months ago
- Make LocusZoom-like plots with your own LD matrix.☆48Updated 3 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆71Updated 3 weeks ago
- ☆46Updated 6 months ago
- ☆16Updated 5 years ago
- ☆23Updated 2 years ago
- ☆57Updated 11 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆31Updated 3 weeks ago
- A collection of various utilities for GWAS summary statistics☆32Updated last year
- An R package for performing STAAR procedure in whole-genome sequencing studies☆97Updated 10 months ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆18Updated last year
- Main ricopili repo for public releases☆51Updated 8 months ago
- ☆19Updated 4 months ago
- corrplot of LDSC genetic correlation results☆56Updated 3 years ago