slowkow / proxysnps
Get SNP proxies from the 1000 Genomes Project.
☆28Updated 6 years ago
Alternatives and similar repositories for proxysnps:
Users that are interested in proxysnps are comparing it to the libraries listed below
- Functional genomics and genome-wide association studies☆64Updated 6 years ago
- software package for integrative genetic association analysis☆34Updated last year
- ☆22Updated 8 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Mediated Expression Score Regression (MESC)☆26Updated 2 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆49Updated 5 years ago
- Generalized linear Mixed Model Association Tests☆37Updated last year
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆17Updated 11 months ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆30Updated 11 months ago
- An interactive graphical illustration of genetic associations and their biological context☆15Updated 10 months ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- ☆40Updated 6 years ago
- Independent Hypothesis Weighting☆15Updated last year
- Genetics ToolboX R package☆31Updated 4 years ago
- Read PLINK BED/BIM/FAM files into R☆40Updated 3 years ago
- QTL Discovery using Annotations☆24Updated 2 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 5 years ago
- Code for implementing Mendelian randomization investigations☆15Updated 9 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆33Updated 6 years ago
- highly-efficient & lightweight mutation signature matrix aggregation☆19Updated 3 years ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- GTEx analysis scripts☆20Updated 7 years ago
- tools to efficiently retrieve and calculate LD☆32Updated 3 years ago
- combining p-values using modified stouffer-liptak for spatially correlated results (probes)☆44Updated 2 years ago
- Colocalization analysis of genetic association signals☆50Updated last month
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 7 months ago
- Toolkit for QTL mapping and meta-analysis.☆16Updated 2 years ago
- ☆20Updated 6 months ago
- Flexible Bayesian inference of mutational signatures☆33Updated last year
- ☆34Updated 3 years ago