Geeketics / LocusZoomsLinks
Make LocusZoom-like plots with your own LD matrix.
☆44Updated 3 years ago
Alternatives and similar repositories for LocusZooms
Users that are interested in LocusZooms are comparing it to the libraries listed below
Sorting:
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆32Updated last month
- Colocalization analysis of genetic association signals☆52Updated last month
- Manhattan++☆28Updated last year
- Visualization of Colocalization Between eQTL and GWAS Data☆84Updated 3 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆46Updated 5 months ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆67Updated 9 months ago
- Software for estimating correlation of trait effect sizes across populations☆47Updated 2 months ago
- Regional association plots☆25Updated last year
- ☆15Updated 4 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆38Updated 2 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated last year
- Enhanced version of the FastQTL QTL mapper☆67Updated 2 years ago
- methods for functional summary-based imputation☆86Updated 3 years ago
- A collection of various utilities for GWAS summary statistics☆29Updated last year
- Fast, integrative fine mapping with functional data☆60Updated 5 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Statistical tools for Quantitative Genetic Analyses☆38Updated this week
- An R package for performing STAAR procedure in whole-genome sequencing studies☆94Updated 6 months ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated this week
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆84Updated last year
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- Cross-population fine-mapping☆38Updated 8 months ago
- Quality control steps for GWAS☆24Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆52Updated 2 months ago
- ☆23Updated 4 years ago
- ☆60Updated 3 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 7 years ago
- R script to make Manhattan-style plot for TWAS☆38Updated 3 years ago