Geeketics / LocusZooms
Make LocusZoom-like plots with your own LD matrix.
☆40Updated 2 years ago
Alternatives and similar repositories for LocusZooms:
Users that are interested in LocusZooms are comparing it to the libraries listed below
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆31Updated last year
- ☆35Updated 4 years ago
- Statistical tools for Quantitative Genetic Analyses☆36Updated last week
- Colocalization analysis of genetic association signals☆52Updated 5 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- ☆15Updated 4 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆43Updated 2 months ago
- Regional association plots☆25Updated last year
- Manhattan++☆28Updated last year
- Sequence kernel association test (SKAT)☆49Updated 2 months ago
- Cross-population fine-mapping☆35Updated 4 months ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated 7 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆59Updated 6 months ago
- Quality control steps for GWAS☆21Updated last year
- Enhanced version of the FastQTL QTL mapper☆64Updated 2 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆28Updated 11 months ago
- ☆32Updated last year
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 3 years ago
- A collection of various utilities for GWAS summary statistics☆27Updated 11 months ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 5 months ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆30Updated last year
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- Scripts to run mQTL analyses as described in the ARIES mQTL paper☆9Updated 9 years ago
- Fast, integrative fine mapping with functional data☆57Updated 5 years ago
- Main ricopili repo for public releases☆47Updated 3 weeks ago
- ☆46Updated 6 months ago
- Regional association plots☆26Updated last year
- R script to make Manhattan-style plot for TWAS☆37Updated 3 years ago
- Software for estimating correlation of trait effect sizes across populations☆46Updated 3 weeks ago