Geeketics / LocusZoomsLinks
Make LocusZoom-like plots with your own LD matrix.
☆44Updated 3 years ago
Alternatives and similar repositories for LocusZooms
Users that are interested in LocusZooms are comparing it to the libraries listed below
Sorting:
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆33Updated 3 months ago
- Manhattan++☆28Updated last year
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Colocalization analysis of genetic association signals☆54Updated 3 months ago
- Visualization of Colocalization Between eQTL and GWAS Data☆85Updated 3 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆49Updated 6 months ago
- ☆16Updated 4 years ago
- Software for estimating correlation of trait effect sizes across populations☆49Updated 3 months ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆40Updated 2 years ago
- Statistical tools for Quantitative Genetic Analyses☆38Updated 3 weeks ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated this week
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆68Updated 11 months ago
- Quality control steps for GWAS☆24Updated 2 years ago
- Regional association plots☆25Updated last year
- Fast, integrative fine mapping with functional data☆60Updated 6 years ago
- ☆62Updated 3 years ago
- A Fine-Mapping pipeline☆21Updated 6 years ago
- Cross-population fine-mapping☆37Updated 9 months ago
- R script to make Manhattan-style plot for TWAS☆40Updated 4 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆53Updated 4 months ago
- methods for functional summary-based imputation☆88Updated 3 years ago
- ☆36Updated 4 years ago
- Enhanced version of the FastQTL QTL mapper☆68Updated 2 years ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated 11 months ago
- ☆23Updated last month
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆30Updated last year
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 5 years ago
- ☆23Updated 4 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago