precimed / mixer
Causal Mixture Model for GWAS summary statistics
☆69Updated last year
Alternatives and similar repositories for mixer:
Users that are interested in mixer are comparing it to the libraries listed below
- Partners Biobank genomics data QC☆25Updated 4 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆41Updated 6 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆46Updated 3 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆48Updated 3 months ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆26Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆18Updated 2 years ago
- corrplot of LDSC genetic correlation results☆48Updated 2 years ago
- ☆58Updated 6 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 3 years ago
- Main ricopili repo for public releases☆43Updated this week
- R package for CAUSE☆54Updated last year
- Hypothesis Prioritisation in multi-trait Colocalization☆51Updated 9 months ago
- ☆54Updated 2 weeks ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- R package for quality control of plink genetic datasets☆57Updated 3 weeks ago
- ☆32Updated last year
- Genotype-based Prediction (GenoPred)☆69Updated this week
- Meta-analysis of genomewide association scans☆50Updated 6 months ago
- A collection of various utilities for GWAS summary statistics☆26Updated 8 months ago
- Cross-population polygenic prediction☆76Updated 2 months ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 5 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆55Updated 3 months ago
- A list of awesome tools for complex trait genetics.☆63Updated this week
- GWAS Summary Statistics Data Harmonisation☆22Updated 2 weeks ago
- GWAS Summary Statistics for Brain Imaging Phenotypes☆19Updated 3 years ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆23Updated last year
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆14Updated last month
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics☆32Updated 2 years ago