Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF
☆36Jun 17, 2025Updated 11 months ago
Alternatives and similar repositories for finemapr
Users that are interested in finemapr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Adding random effects model to the METAL software☆15Jun 11, 2023Updated 2 years ago
- Statistical fine-mapping pipeline in FinnGen☆32May 13, 2026Updated 2 weeks ago
- A Fine-Mapping pipeline☆22Sep 13, 2019Updated 6 years ago
- Fine-mapping pipeline for Open Targets Genetics☆29May 11, 2026Updated 2 weeks ago
- Make LocusZoom-like plots with your own LD matrix.☆50Jul 17, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Visualization of Colocalization Between eQTL and GWAS Data☆88May 13, 2022Updated 4 years ago
- An R package for creating ggplot2 based miami plots.☆18Mar 7, 2025Updated last year
- Create LocusZoom-style plots in R.☆22Mar 5, 2023Updated 3 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆131Dec 9, 2024Updated last year
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆75Feb 4, 2021Updated 5 years ago
- ☆58Apr 26, 2026Updated last month
- Create Regional Association Plots☆13Sep 7, 2025Updated 8 months ago
- user-friendly pipeline for GWAS fine-mapping☆14Mar 9, 2025Updated last year
- ☆67Dec 30, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆24Aug 6, 2021Updated 4 years ago
- SCALLOP-INF analysis☆20Oct 24, 2025Updated 7 months ago
- In-house computational biology workflows at Columbia Neurology☆36Sep 7, 2025Updated 8 months ago
- ☆13Jun 15, 2022Updated 3 years ago
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆103May 27, 2025Updated last year
- Regional association plots☆25Apr 1, 2024Updated 2 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 8 years ago
- ☆15Dec 8, 2023Updated 2 years ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆47Mar 16, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Reading, querying and writing GWAS summary data in VCF format☆105Mar 16, 2026Updated 2 months ago
- Regional association plots☆27Apr 1, 2024Updated 2 years ago
- Causal Mixture Model for GWAS summary statistics☆98Dec 17, 2025Updated 5 months ago
- PRS pipeline using PRS_CS☆15May 19, 2026Updated last week
- ☆21Nov 15, 2024Updated last year
- Scripts used for generating Neale Lab UKB results☆20Oct 11, 2022Updated 3 years ago
- Fine-mapping with infinitesimal effects☆20May 5, 2026Updated 3 weeks ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆60Feb 12, 2021Updated 5 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Find causal cell-types underlying complex trait genetics☆96Feb 8, 2026Updated 3 months ago
- ☆12Jun 16, 2023Updated 2 years ago
- Linking GWAS data to analytical tools in R☆157May 20, 2022Updated 4 years ago
- R interface to the IEU GWAS database API☆109May 15, 2026Updated 2 weeks ago
- A GWAS fine-mapping pipeline used in CAUSALdb☆27May 1, 2022Updated 4 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆74Apr 26, 2026Updated last month
- CoMorMent-Containers☆37Feb 23, 2026Updated 3 months ago