variani / finemaprView external linksLinks
Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF
☆35Jun 17, 2025Updated 7 months ago
Alternatives and similar repositories for finemapr
Users that are interested in finemapr are comparing it to the libraries listed below
Sorting:
- Statistical fine-mapping pipeline in FinnGen☆31Oct 3, 2025Updated 4 months ago
- Adding random effects model to the METAL software☆15Jun 11, 2023Updated 2 years ago
- A Fine-Mapping pipeline☆22Sep 13, 2019Updated 6 years ago
- Make LocusZoom-like plots with your own LD matrix.☆49Jul 17, 2022Updated 3 years ago
- Fine-mapping pipeline for Open Targets Genetics☆28Sep 6, 2022Updated 3 years ago
- Create LocusZoom-style plots in R.☆22Mar 5, 2023Updated 2 years ago
- An R package for creating ggplot2 based miami plots.☆18Mar 7, 2025Updated 11 months ago
- Fine-mapping with infinitesimal effects☆20May 27, 2025Updated 8 months ago
- Visualization of Colocalization Between eQTL and GWAS Data☆87May 13, 2022Updated 3 years ago
- ☆56Updated this week
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42May 2, 2018Updated 7 years ago
- user-friendly pipeline for GWAS fine-mapping☆12Mar 9, 2025Updated 11 months ago
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆43Jan 20, 2023Updated 3 years ago
- Regional association plots☆26Apr 1, 2024Updated last year
- SCALLOP-INF analysis☆20Oct 24, 2025Updated 3 months ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆129Dec 9, 2024Updated last year
- In-house computational biology workflows at Columbia Neurology☆36Sep 7, 2025Updated 5 months ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆59Feb 12, 2021Updated 5 years ago
- ☆21Nov 15, 2024Updated last year
- CoMorMent-Containers☆36Dec 6, 2025Updated 2 months ago
- ☆15Dec 8, 2023Updated 2 years ago
- Create Regional Association Plots☆13Sep 7, 2025Updated 5 months ago
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆72Feb 4, 2021Updated 5 years ago
- ☆24Aug 6, 2021Updated 4 years ago
- GENI plots to visualise results from genome-wide association studies☆31Oct 14, 2024Updated last year
- ☆13Jun 15, 2022Updated 3 years ago
- ☆12Jun 16, 2023Updated 2 years ago
- Regional association plots☆24Apr 1, 2024Updated last year
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆100May 27, 2025Updated 8 months ago
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆27Oct 5, 2023Updated 2 years ago
- Set of script for the paper on the cattle graph genome☆13Jan 10, 2023Updated 3 years ago
- Reading, querying and writing GWAS summary data in VCF format☆95Nov 21, 2025Updated 2 months ago
- A GWAS fine-mapping pipeline used in CAUSALdb☆27May 1, 2022Updated 3 years ago
- PRS pipeline using PRS_CS☆15Oct 21, 2025Updated 3 months ago
- ☆30Oct 18, 2021Updated 4 years ago
- ☆63Dec 30, 2021Updated 4 years ago
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Feb 27, 2020Updated 5 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆57Dec 16, 2025Updated 2 months ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago