A GWAS fine-mapping pipeline used in CAUSALdb
☆27May 1, 2022Updated 4 years ago
Alternatives and similar repositories for CAUSALdb-finemapping-pip
Users that are interested in CAUSALdb-finemapping-pip are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆15Sep 7, 2026Updated 3 weeks ago
- user-friendly pipeline for GWAS fine-mapping☆14Mar 9, 2025Updated last year
- An accurate and efficient colocalization method accounting for multiple causal signals☆16Jun 3, 2024Updated 2 years ago
- GWAS genetics Fine-mapping method☆27Jun 11, 2026Updated 3 months ago
- Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)☆10Jan 26, 2026Updated 8 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆10Jan 20, 2023Updated 3 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Updated this week
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- Make interactive LocusZoom plots from a local GWAS file☆10May 9, 2025Updated last year
- PredictDB Pipeline for GTEx v7 data☆18Nov 9, 2022Updated 3 years ago
- Create Regional Association Plots☆13May 27, 2026Updated 4 months ago
- A tool to plot significant regions of GWAS☆31Jan 27, 2023Updated 3 years ago
- Fine-mapping with infinitesimal effects☆20May 5, 2026Updated 4 months ago
- ☆22Aug 2, 2025Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- R package for processing of GWAS output☆17Jul 9, 2024Updated 2 years ago
- R package: determining cutoff values from bimodal data☆11Mar 17, 2024Updated 2 years ago
- This repository contains scripts related to Surendran P, Stewart I et al. Nature Medicine 2022 "Rare and common genetic causes of chemica…☆19Jul 15, 2022Updated 4 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 6 years ago
- Base-wise aggregation and functional prediction for human non-coding regulatory variants☆14Dec 20, 2023Updated 2 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago
- Statistical fine-mapping pipeline in FinnGen☆34Aug 14, 2026Updated last month
- The cattle Genotype-Tissue Expression atlas v1☆30Mar 14, 2023Updated 3 years ago
- Data visualization with R☆12Dec 12, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- General Use Scripts and Helper functions☆16Mar 29, 2018Updated 8 years ago
- Fast manhattenplots using ggplot2☆14Apr 24, 2026Updated 5 months ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆50Dec 16, 2024Updated last year
- ☆21Nov 15, 2024Updated last year
- Software to infer latent pleiotropic components from GWAS summary data☆17Jan 30, 2025Updated last year
- From QC to summary statistics☆17Jun 27, 2020Updated 6 years ago
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆18Mar 18, 2025Updated last year
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆18Mar 17, 2026Updated 6 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆39Jun 15, 2023Updated 3 years ago
- Make LocusZoom-like plots with your own LD matrix.☆51Jul 17, 2022Updated 4 years ago
- Heritability Estimation with high Efficiency using LD and Summary Statistics☆14Feb 14, 2024Updated 2 years ago
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 4 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆140Dec 9, 2024Updated last year
- R package for tissue-specific gene enrichment☆16Mar 10, 2022Updated 4 years ago